KEGG   Polyodon spathula (Mississippi paddlefish): 121313680
Entry
121313680         CDS       T07273                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121313680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121313680
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspa04147]
    121313680
Membrane trafficking [BR:pspa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    121313680
Exosome [BR:pspa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121313680
  Exosomal proteins of other body fluids (saliva and urine)
   121313680
  Exosomal proteins of colorectal cancer cells
   121313680
  Exosomal proteins of bladder cancer cells
   121313680
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 121313680
NCBI-ProteinID: XP_041102399
LinkDB
Position
3:complement(93679676..93686488)
AA seq 223 aa
MFHGIPAAAGIGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSGMSASDELDDSQVRQMLFDLESAYNAFSRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcacggaatcccagcggcagcaggcataggaggagccccagctaataaaccagaa
ttgtatgaggaggtcaaattgtataaaaatgccagggagcgtgaaaagtatgacaacatg
gctgagctgtttgctgtagtaaagacacttcaggccttagagaaagcttacatcaaggac
tgtgtgaccccgaatgagtacacagctgcctgctccagactgctggttcagtacaaggct
gctttcaagcaggtgcaggggtccgatgtgggctccattgatgatttctgcaggaagtac
aggctggactgtccactggctatggagaggattaaagaggacaggccaatcaccattaaa
gatgacaagggcaacctgaaccgctgcattgcagatatcgtttcgctttttatcacagtg
atggataagctgcgactggagatccgagccatggacgagatccagccagacttaagggag
ctgatggaaaccatgaacagaatgagtaacatgcccccagattccgaggcgaaggataaa
gtcaatctctggctgacgactctcagcgggatgtcagcctccgatgaactggacgactcc
caggtccgtcagatgctgtttgacttggagtctgcgtacaacgcctttagccgtttcctg
cattcctcctaa

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