Polyodon spathula (Mississippi paddlefish): 121313741
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Entry
121313741 CDS
T07273
Symbol
slc22a13b
Name
(RefSeq) solute carrier family 22 member 13b
KO
K08209
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121313741 (slc22a13b)
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
121313741 (slc22a13b)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
121313741 (slc22a13b)
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
MFS_1_like
MFS_2
Motif
Other DBs
NCBI-GeneID:
121313741
NCBI-ProteinID:
XP_041102480
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Position
4:935234..967217
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AA seq
552 aa
AA seq
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MSYFGEILTAVGEFGAFQKRLLVATCIPNICMAFHVFGQVFTGISVAHHCSTDWILKLSP
NLTRQEQWNLTLPKEKDGSFKKCEMYAPVDRDIEFIKAYGLNSTVQCQDGWVYDTSQYKS
TLVTEFNLVCGNSGLNELSQSIFMAGLLIGALVFGPLADRIGRRPVVLLSICLQFASGIA
AAFSPNIYVYISLRFVVGTTISGLMINIFVLGTEWYGISKRSFSIILTHAAFSLGLMVLA
GMAYGVREWRALQLGLSVPLALTGIFFCILPESARWLLTQGKQEEAKKLILKAASVNKRT
VPETLLQQMEGEKSGKTGSVLDLFRIPRLRRITLVMCYIWFVTSLVYYGLGLNVGNFGLD
IYLTQFVFGLVEIPARIGSVPLLENFGRRKCQGAVLLLGGAACLLIIAIPEDVSVAVTVL
AVLGKFAIASSFSICYVYSAELFPTVVRQTGVGLVSMSARVGGIIAPLIRLLEVYHSSIP
LVIYGVTPLIGSVLCILLPETLNTELPDHTYQTDRSHQPAMQIPQSYNTGGPRSSGPLAG
RPAGARPVYGGR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagttactttggggagatcctcacagctgtcggtgagttcggagcatttcagaagcgt
ctgctggtggcaacctgcattcctaatatctgcatggccttccacgtgttcggacaggtg
ttcacagggataagtgtggcgcaccactgtagcactgactggatcctgaagctgagcccc
aacctaacgagacaagagcagtggaatctaacactgcccaaggagaaggacggctccttt
aagaaatgtgagatgtacgctccggtcgaccgggatattgagttcattaaggcgtacgga
ctgaactccactgtgcagtgtcaagatgggtgggtttatgacacgtcgcagtacaagtca
acgttagtgactgagtttaatctggtttgtggtaacagtggactcaatgagctgtcccag
tctatcttcatggctggtctccttattggagccctggtgtttggcccactagctgacaga
attggtcgccggcccgtcgttctcctctcaatatgtctgcagtttgcatctgggattgct
gctgcgttttcaccaaatatttacgtctacatctcccttcgttttgttgttggcaccacc
atatccgggctaatgatcaatatttttgtgttgggcacagagtggtatggaatctccaag
cgttccttttccatcatcctcacccatgctgccttttcattggggctgatggttctggct
ggcatggcatacggtgttcgggagtggagggccctgcagcttgggctgtctgttccgtta
gcactcactggcattttcttctgcattcttccggaatcagcccgctggcttctgacccaa
ggaaagcaggaggaagcgaagaagctgatcctaaaagctgcgagtgtgaataaacgcaca
gtgccagagaccctgcttcaacagatggaaggtgagaagtcaggcaagaccggaagtgta
ttagatctgttcagaataccccgtctgaggagaatcacactagtcatgtgctatatctgg
ttcgtgaccagtcttgtgtactatggattgggcctcaatgtcggtaatttcgggctggat
atttatttgacccagtttgtttttggcttggtggagatccctgcacgtattggatcagtc
cctctcctggagaacttcggcaggaggaaatgtcagggagctgtcctacttttgggcggg
gcagcttgtcttctcattatagccattcctgaagatgtatctgttgcagtgactgtgctg
gctgtactagggaagtttgccattgcttcctccttttccatttgctatgtgtacagcgct
gagctgttcccaacagttgtaaggcagaccggtgttggcttggtgtccatgtcggcccgt
gttgggggcatcatcgccccgctgatcagactcctggaggtgtatcacagctccattcct
ctggttatatatggggtcaccccattgattgggagtgtcctttgcatcctactgccagaa
acactgaacactgagctgccagaccacacctatcaaactgataggagccaccagccagcc
atgcagataccccagagctacaatactggaggaccacgcagctcggggccgcttgcaggc
aggcccgcaggtgcacggccagtctacgggggtcgctga
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