Polyodon spathula (Mississippi paddlefish): 121313753
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Entry
121313753 CDS
T07273
Name
(RefSeq) polycomb complex protein BMI-1-like
KO
K11459
polycomb group RING finger protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121313753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121313753
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121313753
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
COMM_HN
COMM_domain
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
C2c1_helical
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121313753
NCBI-ProteinID:
XP_041102491
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Position
4:complement(8971318..8985594)
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AA seq
524 aa
AA seq
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MELSEYVQMGLQFLADPEQFNTKMFSVFLRISFQSLVSPHCGAAILDDPELKHVDPTLLK
HCHVAATTSILEISKHNADKSTLSTFLEECKFDGERIDIFYSEYQKNQTKLENLLGSLGR
CPPHICDGSWRLEYQLKNSHVHKVNQPAYLITLNVENRGSRSTGDINFTCTMEQLQDLVA
KMKDAAKSLEKATRVYVIYRIMHRTTRIKITELNPHLMCVLCGGYFIDASTIIECLHSFC
KTCIVQYLETSKFCPICDVQVHKTKPLHNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYA
DHPSADVANGTNEDRGEVSDEDKRIITDDEIISLSIEFFDQNKDENQGDAQKEKMEEVNK
RYLRCPAVMTVMHLRKFLRSKMDIPNTFQIEVMYEEEPLKDYYTLMDIAYIYTWRRNGPL
ALKYGVRQSCKKMKLNHPQDGLNSTGAELESDSGSDKANSPAGVPSTSSSLPSPSTPVQS
PHPHFPHISSTMNGTSTNPSTNRQPPFSKPARQTSVNGCSTSSG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcggagtatgtgcaaatggggcttcagttcttggcggatcctgaacaattt
aacacaaaaatgttctcagtttttttacgtatctcctttcaaagccttgtatctcctcac
tgtggtgccgcgatcttagatgaccccgagttaaaacatgttgaccctactttgttaaaa
cattgccatgtagctgccacaacctcaatactggagatttcaaaacacaatgcagacaaa
tcaacacttagcacatttcttgaagaatgtaaatttgatggggaacgaatagacattttt
tacagtgaataccagaaaaaccaaactaaattggaaaacttgctaggaagcttaggaagg
tgtcccccgcatatatgtgatggttcttggcgactagagtatcaactaaagaacagccat
gttcacaaggtcaaccagcctgcatatctgattaccttgaatgtagagaacaggggctca
agatccacaggtgatattaatttcacttgtacaatggagcaactacaggacctggtggcg
aagatgaaagacgcagctaaaagcctcgaaaaagcaactcgagtctacgttatatacaga
ataatgcatcggacaacgagaataaaaatcactgagctgaacccgcatttaatgtgcgtg
ctctgtggtggatacttcatagatgcatcaaccataatagaatgtctgcactcattttgt
aaaacctgcattgtccagtatttggaaaccagcaagttctgtcctatttgtgatgtccag
gttcataaaactaaaccgcttcataatattaggtcagataaaactctccaagacattgtg
tacaagttggttcctggtcttttcaaaaatgaaatgaaacgaaggagggatttttatgct
gatcacccttcagctgatgttgcaaatggaactaatgaagacagaggagaagtttcagat
gaagacaaaaggattattacagacgatgagatcataagtttgtccattgagttctttgat
caaaataaggatgaaaaccaaggggatgcccaaaaagagaaaatggaggaggtgaataag
aggtatttgcgatgtcctgcagtaatgacagtgatgcatttaagaaagtttctgaggagt
aagatggatatccctaatacttttcagattgaagtcatgtatgaagaggagccattaaaa
gattattacacactcatggacattgcctacatttatacatggagacggaatggaccactc
gctttaaaatacggggtccgtcaaagctgtaaaaagatgaagctaaaccacccgcaagat
ggattaaacagcacaggcgctgaactggagagtgacagcgggagtgacaaggccaacagc
ccagctggagtgccatccacctcgtcgtctttgccaagccccagcacccctgttcagtct
ccacatccacactttcctcacatctccagcaccatgaatggaacctccaccaaccccagc
accaatcgccagccacctttttccaaaccagctcgacaaacatccgttaacggatgttca
acatcttcaggatga
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