Polyodon spathula (Mississippi paddlefish): 121313844
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Entry
121313844 CDS
T07273
Name
(RefSeq) protein LRATD2-like
KO
K22810
protein FAM84B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121313844
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121313844
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRAT
NLPC_P60
SH3_CYT4
zf_CopZ
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
121313844
NCBI-ProteinID:
XP_041102566
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All DBs
Position
4:49985039..49986585
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AA seq
272 aa
AA seq
DB search
MGNQFEKLTHLTYAEVPTADPTGVDQEDGPRIGVSYIFSNDDDDLEDSVVGSAKDPNQEE
NYDTCNELECSVFYRDECVYEKSRSAGDLSTYSPENLLNKCKPGDLVEFVAKNQYPHWTV
YVGDFQVVHLHRAEIKNDFMTDASQGRRCRIVNDVYKFKPQKPEMVVQNAMEQVGARDRE
LSWRNSECFAAWCKFGKREFKVGGEIRIGKQPYSLKIQLSEKKSHTLEFQSMEDLIMERR
RNDQIGKNAVIQELVSHLHSEEEGSGTDHNAQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcagtttgagaaactgactcatttaacttacgcagaagttccgacagcagac
ccgactggggtagatcaagaagacggtccgcggataggggtgtcttatatattttctaac
gatgacgatgatttggaggatagtgttgtgggatcagcgaaggacccgaatcaggaagag
aactatgacacatgcaacgagctggagtgttctgtattctacagagatgagtgcgtatac
gagaaaagccgcagcgctggagacctgagtacatattctccagaaaatttgttaaacaag
tgcaaacctggagatttggtggagtttgtggctaaaaaccagtacccccattggactgtg
tatgttggagatttccaggtagtccacctgcacagagctgagatcaagaatgattttatg
acagatgctagtcaagggaggagatgtagaattgttaacgatgtttacaaattcaaacct
caaaaacccgaaatggtggtgcagaatgccatggaacaggtcggggcaagagacagggag
ctaagttggagaaactctgaatgttttgctgcttggtgcaaatttggaaaacgggagttc
aaagttggaggggagatcaggattggcaaacaaccttacagcttaaaaatacaactttca
gagaaaaagagtcacactttggagtttcagagtatggaagatttgatcatggaaaggagg
agaaacgatcagattggtaaaaacgctgtgatccaggagctagtcagccatctacattct
gaggaggaaggaagtgggactgatcacaatgcacagtga
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