Polyodon spathula (Mississippi paddlefish): 121313907
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Entry
121313907 CDS
T07273
Name
(RefSeq) myb-related protein A-like
KO
K09421
myb-related protein A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121313907
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121313907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cmyb_C
Myb_DNA-binding
Myb_DNA-bind_6
LMSTEN
Myb_DNA-bind_7
SANT_DAMP1_like
SapB_2
Motif
Other DBs
NCBI-GeneID:
121313907
NCBI-ProteinID:
XP_041102622
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Position
4:complement(23892488..23911838)
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AA seq
753 aa
AA seq
DB search
MASMRSRSEDEDDEGILQDQDCKSAELRNSKKLLSKVKWSREEDEKLKRLVDQHGPEAWD
LISNYLPKRTDAQCQHRWQKVLNPELVKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLHG
RIGKQCRERWHNHLNPEVKKSLWTEEEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNH
WNSTMRRKVEHEGYLQAESNSLCRSKHASKRRSKAYSHLDALQTQNQFVMAFPTQITGYS
FSSADGNCMEGIQDTSVCVPHPFDDDPDKEQRIKELELLLMSAENEVGRKRVSCQSERFS
SWSSSGCMTNTTVSSLEDQSVEYCRAEQPPSTAVPQQPSPSKFLAVEASAVLSSLQTIPE
FAETLELIDSDPVAWSDVTSFSLSEVASPMKQTAAPFPHNQECMILGYQFDGSAISDMSR
NCSRSNGQMQLIPLTSPVVAKFSTPPSILRRKKKERTNHSSSSEGNSTSFMDTSEVSPRN
TPVKSLPFSPSQFFNISGNENFNLDNPALTSTPVCGQKYLVTTPLQKEMTPKGQKENAGF
RTPKIRKSILAPTPRTPTPFKNALAAQEKKYGPLKMMHQPLAYLEEDIREVLKEETGMDI
FLREELEPAFRAWKQEHDAPARKVRKSLVLDAWEKEGLDVHLFPQDQLSNEQPPSGNLLT
CSLFMTPLLDKVEGRCSPVPVKEEPSITHQHSAPVKENPCMLRSTRFETPIQMNSEWETV
VYGKTEDQLIMTEQARKYLNAFNTGSTSRALVL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccagcatgaggtctcgcagtgaggatgaagatgatgaaggaatccttcaggatcaa
gactgtaagtctgctgagctgaggaattctaagaaattgttgagcaaagtgaagtggtcc
agagaagaggacgagaagctaaaaaggttggtagaccaacatggaccagaagcctgggat
ttaatttcaaattaccttccaaaacggaccgatgcgcagtgtcagcatcggtggcagaag
gtactcaacccagagctggttaaaggaccctggaccaaagaggaggatcaaagggtcatt
gagcttgtgcacaagtacggcccgaagcgctggtctgtgattgccaagcacctccatggc
agaattggcaaacagtgccgggaaagatggcacaaccacctgaaccctgaggtgaagaag
tcattgtggactgaggaagaggaccgcgtcatttatgaagcccacaaacgcctaggaaac
agatgggcagaaattgctaaattgctccctggaaggacagataattcaatcaagaaccac
tggaactccacaatgcggaggaaggtggaacatgaagggtacttgcaagctgagtcgaac
tccctttgtagatccaaacatgcatccaaacgacgctccaaagcatactcccacctggat
gccttacaaacacagaatcagtttgtcatggcatttccaactcagattactgggtactcc
tttagttcagcagatggaaactgcatggagggtattcaagacacttcagtgtgtgttcca
catccgtttgatgatgatcctgataaggaacaaagaattaaggaacttgagctgcttctt
atgtcagctgagaacgaagttggaagaaagcgagtctcatgtcagagtgaaagattttct
agctggtccagtagtggctgcatgacaaatactacagtgagcagcctggaggaccaaagc
gtggaatactgccgagccgagcagcccccgagcacagctgtcccccagcagccgtctccc
agcaagttcctggcagtggaagcgagtgccgtgctgtcatccttgcagacaatcccagag
tttgcagaaacactggagcttatagattctgatcctgttgcgtggagcgatgtcaccagc
ttcagcctctctgaagtggcctctccgatgaagcagactgcagctccctttccacacaac
caggagtgtatgattctaggctaccagtttgatggcagcgcaatatcagacatgagcagg
aactgtagcaggagcaatgggcaaatgcaactgattcctttaacatcgcctgttgtggcc
aagttcagcacacccccgtccatcctgaggaggaagaaaaaggagaggacaaaccattcc
tcatcgagcgagggaaacagcacttccttcatggacaccagtgaggtgtcaccaagaaac
actcctgtcaagtcactgcccttttccccttcacagttcttcaacatttcggggaatgaa
aatttcaatctggacaacccagcccttacctcgactccagtttgtggtcagaaatatctt
gtcacaactcccctgcagaaagaaatgacgcccaaaggccagaaggaaaatgctgggttc
agaacacctaaaatccgaaagtctattttagcccccacacctcggactccaacacctttt
aagaatgcacttgctgcccaagagaagaagtatggacccttaaaaatgatgcatcagcca
ctggcttatctggaagaggacattcgcgaggtgttgaaggaggagacaggaatggatata
tttctcagagaggaactcgaaccagccttcagggcctggaaacaagagcatgatgctcct
gcaagaaaagtcaggaagtcccttgtcttggatgcctgggagaaagaaggcctcgatgtc
cacttattcccacaagaccagctctctaatgaacagcccccatctggaaacctgctcacc
tgctccttattcatgacaccgttgttagataaagtggaaggcaggtgttcaccagtgcct
gtgaaagaggagcccagtataacccaccagcacagtgcacctgtaaaagagaatccctgt
atgttaaggagtacaagatttgaaacacccattcagatgaacagtgaatgggaaacagtt
gtatatggaaagacagaagaccagctgataatgacagaacaagcccggaaatatctgaat
gcatttaatactggtagtacatcaagagcacttgttctttga
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