Polyodon spathula (Mississippi paddlefish): 121314026
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Entry
121314026 CDS
T07273
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121314026 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121314026 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121314026 (gars1)
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121314026 (gars1)
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
121314026 (gars1)
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121314026 (gars1)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121314026 (gars1)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121314026 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
Motif
Other DBs
NCBI-GeneID:
121314026
NCBI-ProteinID:
XP_041102729
LinkDB
All DBs
Position
4:complement(430246..460520)
Genome browser
AA seq
750 aa
AA seq
DB search
MRLRAAPALLRICVQTASSKPLAFHPSAGVGSRRAPLKGRLFSVSARSLKGNKRQSLWQQ
FAEGRNMDGNVEEALAPLRKAVKEQGDLVRQLKEEEAPAVDVSKAVAELKARKRVLEAKE
LALQPQDDIVDRPKLEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQIWRQHF
IQEEQILEIDCTMLTPEAVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDK
KCTAEKRAEMDSVVTQLDNYSQQELAELFVKYNVRSPVTGNDVSPPISFNLMFQTCIGPG
GNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMA
EIEHFVDPNDKSHPKFQSLTNLELTLYSSKAQTSGQSAQKMKLGDAVEQGVINNSVLGYF
IGRIYLYLVKVGVSPDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCYDL
TCHARATKVPLVAEKPLKEAKTVNVVQFDANKGAIGKAYKKDAKLVMEYLAICDECYITE
QERLLNENGEFTIETEGKTFILTQDMVSVKRFQKILHVEEIVPNVIEPSFGIGRIMYSIF
EHTFHVREGDEQRTYFSFPATVAPYKCSVLPLSQNHEFVPFVRELSEALTRNGVSHKVDD
SSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDCMRQIRAEVSDLPSIVRDL
ANGVTTWAEVETKYPIFEGQETGRKETTEE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcagagctgcacccgccctgctcagaatctgcgtgcagactgcaagctccaaa
ccgcttgctttccacccatcggccggtgttgggtcacgtcgagcccctctcaaaggcagg
ctcttctccgtgtcagcgcgttccctgaaaggcaacaagagacagagtctttggcagcag
tttgcagaagggaggaacatggatggtaatgttgaagaggcgctggctcctctgaggaag
gcagtgaaggagcagggcgacttggtgcggcaactgaaagaagaggaagccccagctgta
gatgtcagtaaagctgtggcagagctgaaggctcgcaagcgggttctggaggcaaaggag
ctggctctgcagccgcaggatgacatcgtcgacagacctaaactggaggacaccctgaag
cggaggttcttctacgatcaggcctttgccatctatgggggtgtcagtggactgtatgat
ttcggccctgttggctgtgccctgaagaacaacatcattcagatctggcggcaacacttc
attcaggaagagcagatccttgaaatcgactgcaccatgttaaccccagaggcagtcctc
aagacctctggtcatgtggacaagtttgctgatttcatggtgaaggatgtaaagaatgga
gaatgtttccgtgcagaccacctcttaaaagctcatcttcagaagttaatgtcagataag
aagtgtacagcagagaagagggcagagatggacagtgttgtcactcagttggacaactac
agccagcaggagttagctgagctgtttgtgaagtacaatgtgagatctcctgtcactgga
aacgatgtgagccctcccatctcattcaacctcatgttccagacgtgcatcgggccagga
ggaaacatgccaggctatttgagacctgagactgctcagggaatctttctgaatttcaag
cgcttgctggagttcaaccagggcaagttgcccttcgctgctgcgcagattgggaactcc
ttcaggaacgagatctctccgcgctctggcctcatcagagtcagagagttcaccatggca
gaaatcgagcactttgtggatcccaatgataaaagtcaccccaagttccagagcctgacg
aacctggagctcacactgtactcctccaaggctcagaccagcggccagtctgcacagaag
atgaagctgggagatgcagttgagcagggtgtgatcaacaactccgtcctgggatatttc
attgggaggatctacctatacctggtgaaagtaggggtctctccagacaagctgcgattc
cgtcagcacatggacaatgagatggcccactacgcctgtgactgctgggatgccgagacc
aagacgtcttacggctggattgagattgtgggctgtgctgaccgctcctgctatgacctg
acctgccatgcccgagccaccaaggtgccgctagtggctgagaaacccctaaaggaagcc
aagacagttaatgttgttcagttcgacgccaacaagggagcaatcggaaaagcttacaag
aaggacgccaagctggtgatggaatatctagccatctgtgacgagtgttacatcacagag
caggagagactcctgaatgaaaatggagagttcaccatcgagaccgaagggaagaccttt
atattgacacaggacatggtcagtgtgaagagatttcagaagatcctgcatgtggaggaa
attgtccccaacgtgattgagccgtccttcggtattggaagaatcatgtactccatcttc
gaacacacattccatgtccgtgaaggagatgagcagagaacatacttcagctttcctgcc
actgtagccccatacaagtgctccgtcctgcctctgagtcagaatcacgaattcgtgcct
tttgtccgagagctgtctgaagccctgaccagaaacggagtctctcacaaggtggacgat
tcttccggctccattgggaggcgttacgccaggactgacgagatcggcgtggcgtttggc
atcaccatcgattttgacacggttaacaagacccctcacacagccactctgagagaccgg
gactgcatgcggcagatcagggcggaggtatctgatcttccctccattgtgcgtgacttg
gcgaacggcgtcactacctgggctgaagtggaaaccaagtacccaatctttgaggggcag
gagactgggagaaaagagacgactgaggaatga
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