Polyodon spathula (Mississippi paddlefish): 121314032
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Entry
121314032 CDS
T07273
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04620
Toll-like receptor signaling pathway
pspa04621
NOD-like receptor signaling pathway
pspa05132
Salmonella infection
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121314032 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121314032 (myd88)
04621 NOD-like receptor signaling pathway
121314032 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121314032 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
121314032 (myd88)
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Gene cluster
GFIT
Motif
Pfam:
Death
TIR_2
TIR
Motif
Other DBs
NCBI-GeneID:
121314032
NCBI-ProteinID:
XP_041102748
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Position
4:820180..833560
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AA seq
290 aa
AA seq
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MAGSCRSSAIDFDSIPLTALNFTVRKKLSLYLNPKHVSAADWTALAEAMGFEYLEIKNYE
QHQNPTKMILENWQGTSAQATVGRLLEMLIAVERVDVISDLQGLIEEDCRKYLKKQQLQE
QPVQVPEVDSCVPKTLEMNGITIDDDPSGHMPELFDAFICYCNKDIDFVHEMIRQLEQTE
CKLKLCVFDRDVLPGTCVWSITSELIEKRCKRMVVIISDDYLDSDACDFQTKFALSLCPG
ARSKRLIPVKYKPMKKKFPSILRFLTLCDYTNPCTTSWFWGRLAKALSLP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcgtgtcgcagctcagctatcgactttgacagcattcctttgacggcgctg
aattttactgttagaaagaagctttctctttatttgaatccgaagcatgtgtccgccgca
gactggactgccctggcagaggcaatgggattcgagtacctggaaatcaaaaactacgaa
cagcaccagaatcccacaaaaatgatactggagaactggcaagggacgagcgcgcaggcc
accgtggggaggctgctggagatgctcatagcggtggagcgagtcgatgttatatctgac
ctgcaagggcttattgaggaagactgcaggaagtatctcaagaagcagcagcttcaagag
cagcctgtgcaggtccctgaggtggacagctgtgtgccaaagaccctggaaatgaacggg
atcactatcgatgacgacccttcgggtcacatgcctgagctgtttgatgctttcatctgc
tactgcaacaaggatatcgactttgtgcacgagatgatcagacagctggagcagacggag
tgcaagctgaagctctgtgtgttcgacagagacgtgctccctgggacctgtgtgtggagc
atcaccagcgaactcatagaaaagaggtgtaagcggatggtggtgatcatttcagacgat
taccttgacagtgacgcatgtgatttccagaccaaatttgccttgagcctctgcccaggt
gcccgctcgaaacgcctgatcccagtcaaatacaagcccatgaaaaagaagttccccagc
atcctgcggttcctgacgctctgtgactacaccaacccctgcaccacatcctggttctgg
ggccggctggccaaggcgctctctctcccatag
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