Polyodon spathula (Mississippi paddlefish): 121314089
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Entry
121314089 CDS
T07273
Name
(RefSeq) cullin-2-like isoform X1
KO
K03870
cullin 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121314089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121314089
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Cullin
121314089
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Rio2_N
TFIIE_alpha
DUF4423
Motif
Other DBs
NCBI-GeneID:
121314089
NCBI-ProteinID:
XP_041102871
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All DBs
Position
4:5880435..5909904
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AA seq
745 aa
AA seq
DB search
MSLKPRVVDFDETWNKLLTTIKAVVMLDYVERATWNDRFSDIYALCVAYPEPLGERLYTE
TKIFLENHVQHLYKKVLESEEKVLGMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTE
ADLQYGYGGVDMNEPLMEIGELALDMWRKLMIEPLQTILIRMLLKEIKNDRCGEDPNQKV
IHGVINSFVHVEQYKKKFPLKFYQEIFEGPFLAETGEYYKQEASNLLQESNCSQYMEKVL
ARLKDEEVRCRKYLHPSSYAKVIHECQQRMVADHLQFLHGECQDIIRQEKRDDMANMYTL
LRAVSSGLPHMIQELQNHIHDEGLRATSNLSQENMPTRFVESVLEVHSKFVQLINTVLNG
DQHFMSALDKALTSVVNYREPKSICKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSFIT
VFKYIDDKDVFQKFYARMLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDM
SVSADLNNKFNNFIKTQETVVDLGISFQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMF
ELFYNQHFSGRKLTWLHYLCTGEVKMNYLSKPYVAMVSTYQMAVLLAFNNSETVSYKELQ
DSTQMNEKELTKTIKSLLDVKMINHDSEKEEVEAESTFSLNLTFTSKRTKFKITTSMQKD
TPQEIEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVINQSKARFNPSISMIKK
CIEVLIDKQYIERSQSSSDEYSYVA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaaaccgagggtggtggactttgacgaaacatggaacaaactcctgaccaca
atcaaagcagtagtgatgttggattatgtggagagagcaacatggaacgatcgcttctct
gacatttacgcgttgtgtgtggcatatccagaacctctgggtgaaaggttgtacacagaa
acaaaaatatttctggaaaatcatgttcagcatttatataagaaagtactagaatcagaa
gagaaggtattggggatgtaccacagatactgggaggagtacagtaaaggggcagactac
atggactgcttatacaggtacctcaacacacagttcatcaagaagaacaaactgactgaa
gctgacctgcagtatggctatggtggggtggacatgaatgaaccactaatggaaatagga
gagctagcgcttgacatgtggaggaaactgatgattgagcctctgcagaccattctgatc
cgaatgctactaaaagaaattaaaaatgaccggtgtggtgaggacccaaatcaaaaagta
atccatggggttatcaactcctttgttcatgttgaacagtacaagaaaaagtttcccctt
aagttttatcaggaaatatttgaaggcccttttctggctgaaacaggagagtattacaaa
caggaagcatccaatttactgcaagagtcaaactgctcacaatatatggaaaaggtttta
gccaggttaaaagacgaagaggttcgatgtcggaagtacctacaccccagctcgtatgcc
aaagtgattcacgaatgccagcagagaatggtggcagaccacttgcagttcctacatggg
gaatgtcaagatatcatccgacaggaaaagagagatgacatggccaacatgtacacgcta
ctgcgggctgtgtctagtgggttacctcacatgattcaagagctacagaaccatatccac
gatgagggcctaagagcaaccagcaacctgtctcaggaaaatatgccaacacgttttgtg
gagtctgtgttagaggttcatagtaaatttgttcagctcatcaacactgtcctgaatggc
gaccagcactttatgagtgcacttgataaggctttgacttcagttgtaaactacagagag
ccgaagtccatttgcaaggcccctgaactgcttgcaaagtactgtgacaacctgctaaag
aagtctgcaaagggaatgacagagaatgaggtggaggacaagctgacgagcttcattact
gtatttaaatacatagatgataaagatgtgtttcagaagttttatgcaagaatgctagca
aagagattaatacatggcctgtcgttgtctatggattcagaagaagccatgatcaacaaa
ctaaagcaagcttgtgggtatgaatttaccagcaagctccatcgaatgtacacagacatg
agcgtcagtgctgacctgaacaacaaatttaacaactttattaaaacccaggaaactgtc
gttgaccttggaataagttttcagatctacgtactgcaggcaggggcatggcctttaaca
cacgttccatcctccacatttgccattcctcaggagctggaaaagagtgtacagatgttt
gaattattttacaaccagcacttcagtgggaggaagctaacatggctgcactatctttgt
acaggtgaggtcaaaatgaactatctctccaagccctacgttgcgatggtttctacctac
caaatggcagtacttctggctttcaataacagcgagacagttagttacaaggagctccag
gacagcacgcagatgaatgagaaagaactgacaaaaaccatcaagtccttgctggacgtt
aaaatgattaaccacgattctgaaaaggaagaggtagaagcagagtctacattttcatta
aatctgactttcaccagtaaacgaaccaagtttaaaattacaacatcgatgcagaaggac
accccgcaggagatagagcagactcggagtgccgtggacgaggacaggaagatgtattta
caagctgctatagtccgtatcatgaaagcacgcaaagttctgagacataatgcactaata
caggaggtcattaaccaatcaaaagccagatttaaccccagtatcagcatgattaagaaa
tgcatcgaggtgctgatcgacaaacagtatattgaaagaagtcagagttcatcagatgag
tacagctacgtagcatga
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