Polyodon spathula (Mississippi paddlefish): 121314097
Help
Entry
121314097 CDS
T07273
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314097
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121314097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
zf-C2H2_6
Homeodomain
Zf-C2H2_ZNF451_C
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121314097
NCBI-ProteinID:
XP_041102920
LinkDB
All DBs
Position
4:complement(6824931..6905058)
Genome browser
AA seq
1184 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTSYNNVVEANSDSDDEDKLHIVEEESVTDAADCENNVADD
DLPSNHAVLPENGQGEEEEEEEEEAWEEETKGEDTLGPEAQPGDVGFKVDDACDSEAEDE
QNNDRIVEEMLQQGDTAVIYPEAPEESQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRYTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTAHKSGRDQRHVVQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISVMPVN
GRPRPAGKTSHCPSPSLSSSPSTPARTQLREKGDNSKPLQEQLPANQIKVEPVDYEYKPI
VVTSGISCATPLQNGAFNGGTPLQTTTSSQGVVQAVVLPAVGLVSPISINLSDIQNVLKV
AVDGNIIRQVLESAHANAAKEQGGVQPGGHSLISAFSLPLVDQDGTTKIIINYSLEQQPS
QVQILPQSLKKENPSPVEIFKTEKLPEDLTVKPGKSKIPKTENSSSTCLLCDGCPGGLDA
LQEIKHCNLKSEGGVLTSQVNGENAEKTDSTVSSPTAEGSLSLGQPPLKNLLSLLKAYYA
LNAQPTTEELSKISDSVSLPLDVVKKWFEKMQTGQIHVGATSPSEHEDISSESGETQNSL
DPAGDVPDSTTTAESPLQLTKTQVILITPSSMKTNSSRTNTPSPSPLNLSSTGSVLVKTE
EDTEEGAQAEPLDLSLPKQPREEMEQATSTSVYQNSVYSVQEEPLNLTCTKKEQPQSDSI
NTSPNPVYVCPPSANPINIAIPTVTTQLPAIVAITDQGSVPCLRALGTNQQTILIPQVTY
TYSTLDTSPAVPEAQQKTVQANGSQEERQETSSEGVSTVEDQNDSDSTPPRKKMRKTEHG
MYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEHMRLHSGEKPYQC
DKCGKRFSHSGSYSQHMNHRYSYCKREAEEREGLELNEEEEEGEGPGAAGEILPGEQLSG
SRAASPPSLLDSDDRESSTRGEEEEEEEEETEEEEEEETETKEETETKEDIEMKEEGEDM
QVGEKEHGDSGEHQEEKGEEMETEEGAGEKEMGTYENPSEIPGVNREDSEEHEEENGEEM
ETEEGAGEKEMGTDEKPSEIPQVNREDSEEEKTPEKIDDDNNKI
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaatccgaggaggaataacgtt
accagctacaacaacgtggtggaagcgaactccgattcagatgatgaagacaagctacat
atcgtggaggaggagagcgtgacagacgctgcagactgtgagaacaatgtggcagacgat
gacttgccgagcaaccatgcagtattaccagagaacgggcaaggagaggaggaggaggag
gaggaggaggaagcttgggaggaagaaacaaaaggagaagacaccttggggcctgaagct
cagccaggggacgttggatttaaagtagacgatgcatgtgactcggaagctgaagatgaa
caaaacaatgaccggatcgtagaggaaatgctgcagcagggagacactgctgtcatctac
ccagaggcacctgaggagtcacagaggcaggggacacccgaagccagcggccacgacgag
aacgggactccagatgcattttcacagctgctcacatgtccgtactgtgacagaggatac
aagcgatacacctctctgaaagaacacatcaagtaccggcacgagaagaatgaagacaac
ttcagctgctccctctgcagttacacgtttgcctacagaacacaacttgaacgtcacatg
acggcacacaaatctgggcgggatcagcgtcatgtagtacagtctgggggtaatcggaag
tttaagtgcactgaatgtggaaaggcatttaaatacaagcaccacctaaaggagcacttg
cgtatccacagtggggagaagccctatgaatgcccgaactgcaagaagcgtttttcccac
tccggctcttacagctcacacattagtagtaagaaatgcatcagtgtgatgcctgtgaac
ggacgtccccggccggcgggcaagacatctcattgcccttctccgtccctctcttcatcg
cccagcacccctgccagaacacagctccgggagaaaggcgacaacagcaagcctttacaa
gaacagcttcccgccaaccaaatcaaagtcgaacctgtggattacgagtacaaaccaata
gtggtgacctctggaatcagctgtgccacgcctttgcaaaacggggctttcaacggtggc
actccgctgcagaccacaacttcatcccagggtgtggtgcaagctgtggtcctgccagct
gttgggctggtctcccctatcagcatcaacctaagcgacatccagaatgttctcaaagta
gccgtagatgggaacattatccgtcaagtcctagagagcgcccacgccaatgcagccaaa
gaacaaggtggagtccagccagggggccattccctcatctcagcattcagtcttcctttg
gttgatcaagatggaacaaccaaaatcatcatcaactacagtttggagcagcagcccagc
caagtccagattctgccacagagcttgaagaaggagaaccccagccccgtagaaatcttt
aaaactgagaagttacccgaagacctcactgttaagcctgggaaaagcaaaattcccaag
actgaaaacagcagcagcacgtgtcttctgtgcgatggctgtcctggtggtttggatgca
cttcaagagattaagcactgtaatttgaaaagtgaaggtggtgttctgacttctcaggtt
aatggagagaatgccgagaaaacagattccactgtttcatcccccaccgctgaaggaagt
ctatccctcggccagccccccttaaagaacctcttgtcactcctaaaggcatattatgcc
ttgaatgcacagcctaccacagaggagctctcgaagatttccgattcagtaagcttacca
ctagacgtggtaaagaagtggtttgaaaagatgcagactgggcagatccatgtgggagct
accagtccgtctgaacacgaggacatttcttctgaaagtggtgaaactcagaatagttta
gatcctgcaggagatgtaccggacagcacgacaaccgcagagagtccacttcagttgact
aaaacccaagttattttaataaccccttcaagcatgaaaacaaatagctccagaactaac
acaccttccccatcaccactaaatctctcttcaaccgggtctgtgctcgtgaagacagaa
gaggacactgaggaaggggcacaggcagaacccctcgacctatcactaccaaagcaaccc
agagaggaaatggaacaggccaccagtaccagtgtttatcagaacagtgtttactccgtt
caggaagaacccttgaacctaacttgcacaaagaaggagcagccgcaaagtgacagtatt
aatacaagcccaaatcctgtttatgtttgcccaccaagtgccaatcccattaacattgct
atacccacagttaccactcagctacctgcgattgtggccattaccgaccagggcagtgtc
ccgtgtctgagggctctgggtaccaaccaacagactatactaattccacaggttacttac
acatattccactttagacaccagtcctgcagttccagaagcccagcagaaaacagtgcaa
gcgaatggaagccaggaggagaggcaagagacgagctccgagggcgtctcaaccgtcgaa
gatcagaatgactcagactctactcctcccaggaagaagatgagaaaaacagaacatggc
atgtacgcctgtgacctgtgtgataaaatattccagaagagtagctcccttttgagacac
aagtatgagcacacaggtaaaaggcctcatgagtgtggaatctgcaacaaggctttcaaa
cacaagcaccacttgatagaacacatgcgactgcactcaggggagaaaccgtaccagtgt
gacaagtgtggcaagcgcttctctcactcaggctcctactcgcagcatatgaaccaccgc
tactcttactgcaagagagaggccgaggagcgcgagggcctggagctcaacgaggaagag
gaggagggggaggggcccggagctgcgggggagatcctccccggagagcagctgtcaggc
agtcgggctgcctcccctccctccctcctggactcagacgacagagaaagcagcacacgc
ggggaggaggaagaggaggaggaggaggagacggaggaagaggaggaggaggagacagag
acgaaggaggagacagagacgaaggaggacatagagatgaaggaggaaggcgaagatatg
caagtaggagaaaaggaacatggagattcaggggagcatcaggaagagaaaggggaggaa
atggagacagaagagggggcaggtgaaaaggaaatgggcacatatgaaaatccaagtgag
attccaggggtcaacagggaggattcagaagaacatgaggaagaaaacggggaggaaatg
gagacagaagagggggcaggtgaaaaggaaatgggcacagatgaaaaaccaagtgagatt
ccgcaggttaacagggaggattcagaagaggaaaaaacgccagaaaaaatcgacgatgac
aacaataaaatatga
DBGET
integrated database retrieval system
