Polyodon spathula (Mississippi paddlefish): 121314131
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Entry
121314131 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314131
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Others
Others
121314131
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121314131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
121314131
NCBI-ProteinID:
XP_041103006
LinkDB
All DBs
Position
4:8408076..8489065
Genome browser
AA seq
2072 aa
AA seq
DB search
MELQGSAAGLSFSGVQAPDMCDKNPVEFSCSPSAEKGCNWAKLIRVECCLPEPYCLWLKL
LARAKLGERKCNCCYHVSRGKATQAYDKNFGTSGTKQKDACEQSEGASPSEEELFSWPGP
KTIQLCRTSQGFGFTLRHFIVYPPESAVSSSLKDEENGNRGRQRNRLEPMDTIFVKQVKE
GGPAHEAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDPVLELCVMPKDEDILQLFSKD
IAALAYSKDAYLKGNEAYSGNARHIPEPPPICYPRVDAKSPAMAQASDVPPSSQTARGAP
QSSSTGEGRGAWLGVKPELGYHLEIPVPPLLPQVNKTQTVVCVCNETVRTVVVPSEKVID
RTARISRSGPSHRTEEVRYSAAVDQAGAVKIRTRPAVVSSAVGQHQYTPARPTETTIFSS
GGRPINYANCPDGHIVSGRPPLSAAGDPFPVASNHYSPSPSSSSPGAHHQSIDWRNYKTY
KEYVDNKRQHMYGCRTIQERLDSLRAAAQNSTDYNQAATGPGGPRGVGGAQVRRRSTSHD
RAYQTSSAMPIRHRSISQERLGGGGSDQEELMKDWPRSASQDALTSTPVRAKNPQAHSCD
YLRRQAEMPPGDCFTSGRPVERQGYGRTELEESHHPAYYDGTWMPSRQQAGQRAVHPAHR
TSSFAIPPNSGYNLGGRKSVSVSPRVQKDTEHFHPTRDFQQHTASVSMERPPCLVVKSSG
LEPSACPKGQISSSLDALKDQRTVVANHLPHTVQPLQPLARAENLPEHGMEPGVSGKILA
QPLAFRSTQQRQKQSPAASSSNGTVSVRTKSRDSSGKEHRKEHTLNTEVQETTTVVLREK
PPLGRPTPQPLRHQSYIMAVNEPEPEPLSDSTCWLPNDARREVNMKRLGEQRKASSSGSH
DDSLASIPFIDEPSSPSADHDVTHIPASAVISAAPAIATIPPSPTTPSPLIRRQLSHDQD
SLRLSIVESESAGKTERSKSCDEGLDNYREEGRSRSSVKHVSSLKGLKAVDGQKSSEDSN
SRRDSSSDVFSDASKEGWLHFRQISTDKSKRVGSGIRPWKQMYAVLRGHSLCLYKDKKEL
LMQGSSQSEEELQPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDREDMLSWIRV
VQENSNLDEENAGVTSRDLISRKIKEYNTMMSSSASKTEQSPKTPRQSLSIRQTLLGAKG
EQKTQSPHSPKQDPDRRLLNKDDTSPPKDKGTWRKGIPSLMRKPFEKKAVQGVTFGVRLD
DCPPAQTNKFVPLIVEICCQLVEERGLEYTGIYRVPGNNTAISNMQEELNKGMTDIDTQD
DKWRDLNVISSLLKSFFRKLPEPLFTNEKYADFIEANRTSDPVDRLKCFKKLLHELPEHH
FETLKFLSAHLKTVADNSEKNKMEPRNLAIVFGPTLVRTSEDNMTHMVTHMPDQYKIVET
LIQHYHWFFTEGGNEDPTTPVRQEAAVESQPVPNIDHLLTNIGRTGGSPGDVSDSATSDS
AKSKGSWGSGKDQYSRELLVSSIFAAASRKRKKQKDKPLPSSSDDELDSVFLKKDHDTNE
SNDGTDKVEVDKETVTLKQKGWSRESQDIKKDIHKSTDLVTRCKKDNRNSFFMREKLPSG
QPSPCPSPSPKRTDSPSLSYRLQALGKSSLSDPSSQLDDASDLGTMNSTSSQASQRTRYR
KWTTPDIKGNESIAAETSSITSDYSTTSSMTYLTGVESSILSPEVQSVAESRGDEADDER
SELISEGRPMETDSESDFPVFASLSAPEKTLREVFQEKDLNSRRGSMGSELAGTEGSTTP
KLDSRRGFVSHKLIECDTLSRKKSARQKTDSESSAETRSDKESNRLSRVFEVMKKGKSTG
SLSSNKSEPEKQELVWRLKITDRLKFRLKSSADDMFGVGTQKTRSPETRKKKIRRRHTMG
GQRDFAELAIMNDWKEQEQADEESELSAMDRLKPKCNSQDLSIREWIARERFRTSNPDVN
ADSPAEPAAVARSQGEGSKPEMPLSVQKDADRSSSVAQISRPSPSESSRQSSEQLNSDSR
DKNKTNLSPAVDTHPYKLSGAQVVRSRFYQYL
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcaaggctctgctgctgggctgagtttctccggtgtccaagccccagatatg
tgtgataagaatcctgtggaattcagctgctctccctcagcggagaagggctgcaactgg
gcgaagctgatcagagtagagtgctgtttaccagagccatactgcctgtggttaaaatta
cttgcaagggcgaaactgggagaacggaaatgtaactgctgttaccacgtttctcggggt
aaagcaacacaggcttacgacaagaactttggaacctccgggacaaagcagaaggatgcg
tgtgagcagagtgagggggcttcgccgagcgaggaagagctgttctcgtggccggggccc
aagaccatccagctgtgcagaacctcccagggcttcggcttcactctacgccacttcatc
gtctaccctccagagtccgctgtcagctcctctctgaaggatgaagagaatggcaacaga
gggagacagcggaacaggctggagcccatggatacaatctttgttaagcaggtgaaggaa
ggagggcctgcacatgaggctgggctctgcacaggagacaggattgtaaaagtgaatgga
gagagtattattggaaagacgtattcccaagtaattgccttgattcaaaacagtgaccct
gttcttgagctctgtgtcatgccaaaagatgaagacattctacaactgttttcaaaggat
atcgcagctctggcatattccaaagatgcatacctaaaaggcaatgaagcttacagtggt
aatgcccggcacatcccagagccacctcctatatgctaccccagagtagacgctaaatcc
ccagcaatggctcaggcctccgacgtgcccccctccagtcaaacagcgcgaggggctcca
caaagcagcagcaccggggagggtagaggagcttggctgggggtgaagcctgaactcggg
taccatctggagatccctgttccccccttgctcccacaggtcaacaagacccagacagtg
gtgtgcgtgtgcaacgaaacggtcagaactgttgtcgttccctctgagaaagtaatcgac
cggacagcccggattagccgatcaggcccctcacacagaaccgaggaggtccggtacagt
gcagcggtggaccaggctggagctgttaagataaggacaagacctgcagtagtgtcctct
gctgtcgggcagcaccagtacacccctgctcgaccgactgaaacaaccatcttctcttca
gggggtcgacctattaattatgctaactgccccgatggacacatagtatctggcagaccc
ccactatcagcggctggcgatcctttcccagtagcctccaatcactattccccttcacct
tcatcttcttctccgggagcccaccaccagagcattgactggcggaactacaaaacctac
aaggagtatgtcgacaacaagaggcagcacatgtacggctgccggactatccaggagagg
ctggacagcttgcgggctgctgcccagaattctacagattacaatcaggcagcgacaggt
cccggtggtccccggggagtggggggtgcgcaggtacgtcgaaggagcacctcccatgac
cgggcttaccagacgtcatcagcgatgcccattcgccaccgtagcatctcccaagaaaga
ctgggaggtggagggtctgaccaggaggaactcatgaaggactggcccaggagtgcttcc
caggatgccctgacctccacgcctgtaagggcaaagaaccctcaggctcactcctgcgat
tacctcagaaggcaggctgagatgcctccaggagactgtttcacttcaggacggcctgta
gagaggcaaggttatggcaggactgaacttgaggagagccatcatcctgcttactacgat
gggacctggatgcccagtaggcaacaggccgggcaacgtgctgtccatccggcccacagg
acttctagctttgccattccacctaacagtggctataacctgggcggcaggaagagcgtc
tctgtctcccctcgcgtccaaaaagatacggaacacttccaccccactagagacttccag
cagcacacagcctcagtgtcaatggaaaggcccccctgcttggtggtcaaaagctctggg
ctggagccttcagcctgtcccaaaggccagatctccagcagcttggatgcactgaaagac
caaagaacagttgtcgcaaaccacctgccccacacagtccagcccttgcagccactggcc
cgagccgaaaacctgccagaacatggcatggagccgggggtctccggtaagatcctggca
cagccccttgcctttaggtccacacaacagcggcagaaacagagtcccgctgcctcttcc
agcaatggtactgtgtctgttagaaccaagagcagagattcctcagggaaagagcacagg
aaagagcacacactcaatactgaggttcaggaaaccacaacggtggtcctgcgggagaag
ccccccttggggaggcccacaccgcagcccctaaggcaccagtcttacatcatggccgtg
aacgagcccgaacccgagcccctctcggactccacttgctggctgcccaatgatgcccgc
cgagaggtgaacatgaagcgcctcggagagcagaggaaggcttccagctccggctctcac
gacgactcccttgcttccattcctttcatagatgagccttctagccctagtgctgaccat
gacgtcacacacattccagcttctgctgtgatttctgctgcaccagccatagcaacaatt
ccccccagcccaaccaccccatctcctctcattcgacgccagttatcacatgaccaagat
tctctcaggcttagtattgtggagtccgagtctgctggaaaaactgagcgttcaaagtca
tgtgatgaaggactggataattacagagaggaagggagatcaaggtcatctgttaagcat
gtgtcaagtctgaaaggactcaaggctgtcgatggccagaagtcttcggaagactctaac
tccaggagggactcctcgtcggatgtcttcagcgatgcctccaaagaaggatggctgcac
ttccgccagattagcacggataagagcaagcgggttggcagtggcatcaggccatggaaa
cagatgtatgcagttctgagaggccactcgctctgcctgtacaaggataagaaggagctt
ctgatgcagggatcctcccagtccgaggaagagctccagccaatcagcatcaaggcctgc
ctgattgacatctcctacagcgacacgaagcgcaaaaatgtgctccggctcaccacctca
gactgcgagtacctgttccaggcggaggaccgagaggacatgctgtcctggatcagggtc
gtccaggagaacagcaacttggatgaagagaacgcaggtgttactagcagggatctaata
agcaggaagatcaaggagtacaatacaatgatgagctcttctgccagcaaaacggaacag
tctcccaaaaccccccgccagtccctcagtattcgacagacattgctgggagcaaaaggg
gaacagaagacccagagtcctcactctccgaagcaggatcctgacagaaggcttctcaat
aaagatgacacaagtccaccaaaggataaaggaacttggagaaagggcattcccagccta
atgaggaaaccatttgagaagaaagcagttcaaggggtgacgtttggtgttagactggac
gactgcccccctgctcagaccaacaaatttgtgccattgatagttgagatctgctgtcag
ctagtggaggaaaggggccttgaatacacaggcatctatcgagtcccagggaacaataca
gccatctcgaacatgcaggaggagctgaacaaaggaatgaccgacatagacactcaggac
gataaatggcgggacctgaatgttatcagcagtttactgaaatcctttttcagaaagctt
cctgaacccctgtttacaaatgaaaagtatgcagattttatagaagccaacagaaccagc
gacccagtggatagactgaaatgttttaaaaaacttcttcacgagctgcctgagcatcat
tttgaaactttgaagtttctgtctgcacatctcaagactgtggctgacaactctgaaaaa
aacaagatggaaccacggaatctggcgatcgtgttcggtcccactctggtcaggacatca
gaagacaacatgacccatatggtgacacacatgccagaccagtacaaaattgtagaaaca
cttatacagcattatcactggttttttacagaaggcggcaatgaagatccaacgactcca
gttcgtcaggaggctgctgttgagtctcagccagtgccaaacatagatcatttgctcacc
aacattggaaggactggaggatctccaggagatgtatcagattcagccactagtgactct
gcaaaatctaagggttcttggggatctggaaaggatcaatacagcagagaactgcttgtg
tcctcaatctttgcagcggccagccgcaaacgaaagaagcagaaggacaagccactgccg
agcagctcggatgacgaactggacagtgtgtttttaaagaaggatcacgacacaaacgag
tccaatgacggcacagacaaagtggaggtggacaaagagactgttactctgaaacaaaaa
ggatggtctagagagagccaggatatcaaaaaggacatccataaaagtactgatttagtg
accaggtgcaaaaaggacaatagaaattcctttttcatgagagagaaattgccctcaggg
cagccttctccttgtccttcaccgagcccaaaacgcacagactctccaagtctcagttac
cgacttcaggcattgggaaaatcctctctctctgatccttcttcccagcttgatgatgct
tcagatctaggtacaatgaacagtacaagctcccaggcttctcaaaggacgcgctacagg
aagtggacaactcctgacatcaaaggtaacgagtccatagcggcagagaccagctccatc
acctcagattattcaaccacgtcgtctatgacatacctgactggtgtggagtctagtatc
ttgagcccggaggttcagtctgtggcagaaagcaggggagatgaggctgatgatgaacgg
agcgaactaatcagcgaaggacggccgatggagacggacagcgaaagtgacttccctgtg
tttgcatcactctcagctcctgaaaagactctgcgggaggtgttccaggaaaaggatctc
aacagccggagagggtcgatggggagcgagcttgcaggaacggagggcagcaccactcca
aagctagacagtcgccgggggtttgtgtctcacaagctgatcgagtgtgacacgctctcc
aggaaaaagtcagcgagacagaaaactgacagcgagtcttcagcagagacacggagtgac
aaggagtcaaacaggttgtcgcgcgtgtttgaggtgatgaagaagggaaaatcgactggg
agcttgtcgtcaaacaaaagcgagcccgagaagcaggagctggtatggcgactgaagatc
acagacaggttaaagtttcgtttgaaaagttcagcagatgacatgttcggggtaggcacg
caaaaaactagatcaccggagacgcggaaaaaaaaaatcagacggagacacaccatggga
ggacagcgagactttgcggagttagctatcatgaacgactggaaagagcaggagcaagca
gatgaagaatccgagctgtccgccatggaccgtctgaaacccaaatgtaactcccaggac
ctttcgatcagagagtggattgcacgagagcgcttccgcaccagcaacccggacgtcaac
gcagactctccagcagagccggctgcagtagccaggagccaaggggaagggtcaaagcca
gagatgcctttatctgttcagaaagatgcagaccgctctagcagtgtagctcagatcagt
aggccatctccgtcagagtcgtcgaggcagtcatcagaacaactgaacagtgacagtcgg
gacaagaacaaaacaaacttaagccctgcagtggacacccatccttacaaattatctggc
gcccaagtggttaggtcacggttctatcagtatctttaa
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integrated database retrieval system
