Polyodon spathula (Mississippi paddlefish): 121314180
Help
Entry
121314180 CDS
T07273
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121314180
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121314180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Stevor
Motif
Other DBs
NCBI-GeneID:
121314180
NCBI-ProteinID:
XP_041103122
LinkDB
All DBs
Position
4:11449513..11495768
Genome browser
AA seq
786 aa
AA seq
DB search
MKPGASEIHNLLETIIILSCLCGIGLSELSGSNLKSYQTEEAPRRLKRSWVWNQFFVLEE
YTGDDPLYVGKLHSDVDKGGGNIKYVLSGEGATSIFIIDENTGDIHATKRLDREEQAYYT
LRAQAVDRLTNRPVEPESEFVVKIQDINDNEPTFLDGPYTAGVPEMSPVGTSVVQVTATD
ADDPTYGNSARVVYSILQGQPYFSVEPKTGIIRTALPSMDREAKDQYLLVIQAKDMVGQM
GGLSGTTSVTVTLTDVNDNPPRFTRKSYQYNVPESLPVVSVVAKIKAADADLGPNAEMDY
RIIDGDGLGMFKVSTDKETQEGVITLEKELDFETKASYTLRIDATNKNIDPQFLSLGPFS
DTANVKVVVEDVDEPPVFTSAVNRMVVSEAARVGTIIGTVAAHDPDTSNSLIRYSIDRNT
DLERFFNIDATTGVISTAKQLDREMNAVHNITLLAMESQDPTLVGRGIAIISVSDINDNA
PMFAIEYETFLCENVQPGQVIQTVSAVDKDEPLSGHRFYFALTPEAASNLNFTLRDNKDN
TASILTKRNGFRRQDQSIYKLPIFIMDSGSPSLSSTNTLTIRVCDCDPDGTAQSCNAEAY
VLPAGLSTGALIAILACVLTLLVLVLLIVTMRRRKKEPLIFDEERDIRENIVRYDDEGGG
EEDTEAFDMAALRNLNVIRDTKTRRDVTPEIQFFSRPSYKSIPDNVIFREFIWDRLKEAD
IDPSAPPYDSLQTYAFEGSGSVAESLSSLESLSTDSDQNYDYLSDWGPRFKKLADLYGNR
EDNVFS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaggtgcatcagaaatccataatttgctggagacaataattatcctcagttgt
ctttgtgggattggtctgtctgaactgtcagggtccaatttaaagtcctaccaaacagaa
gaggccccccgaaggttgaagcgcagctgggtttggaatcaattctttgtgttggaggag
tacacaggcgacgatccactctatgtaggaaagcttcactctgatgttgacaaaggaggt
ggcaacatcaaatacgtcctgtcaggcgagggggcaacctccatctttattattgatgaa
aatacaggggatattcatgctacaaagaggctggatcgtgaagagcaggcctattacacc
cttcgggcacaggcagtcgaccggctcaccaacaggcctgttgaacctgaatctgaattt
gttgttaaaatacaagacattaatgacaatgagccaacgtttctggatgggccttacaca
gcaggagttccagaaatgtctccagtgggaacctcagttgtgcaagtgacagccacagat
gctgatgaccctacttatggaaacagtgccagagttgtctatagcattctacagggacag
ccttacttctcagtggagcctaagacaggcatcatcagaactgcccttcccagcatggat
agagaagctaaggatcagtaccttctggtcattcaagcaaaggacatggtcggacaaatg
ggaggactatctggaacaacctcagtcactgtcaccctcactgatgtgaatgacaatcca
ccacgcttcacacgcaaatcctatcaatacaatgtaccagagtctttgccagtggtctcg
gtggttgccaagataaaagcagcagatgctgatttgggaccaaatgctgaaatggactac
aggattatagacggggatggccttgggatgttcaaagtttctacagataaagagacacag
gagggagtcataactcttgaaaaggagcttgattttgaaactaaagcaagctataccttg
agaatagatgccacaaacaaaaacatcgaccctcagtttttgagcctgggaccattcagt
gatacagcaaatgtgaaggttgttgtggaggatgtggatgaaccgcctgttttcacttct
gcggttaacagaatggtggtttctgaggcagctagagttgggactatcattggaactgta
gctgctcatgaccctgacacttccaacagtctaattaggtattctatagatcggaatact
gaccttgagagattttttaacattgatgccacgactggtgtaataagcactgctaagcaa
ctggacagagaaatgaacgcagttcataatatcacacttctggcaatggaaagtcaagac
ccaacgctagttggaagaggaatcgctattatttctgtttctgatatcaatgacaatgca
ccaatgtttgcaatagaatatgaaacttttctttgtgaaaatgttcagcctggacaggtt
atccagacagtaagtgctgttgataaagatgaaccgctcagtggtcacagattttacttt
gccctgactcctgaggcagcaagcaatttaaactttacccttcgagacaacaaagataat
acagcctcaatcctgaccaaaagaaacggctttcgaagacaagatcagtctatttacaag
ttgccaatttttattatggatagtggaagtccatcccttagcagcactaatactctgacg
attagagtatgtgactgtgatccagatggtacagcccagtcgtgcaatgctgaagcatac
gtgctaccagccggactcagcactggtgcccttatagcaatcctggcttgtgtcctaaca
ttgctagttctggtgctgctcattgtcacaatgagaaggcggaagaaggaaccactgata
tttgatgaggagcgggatattcgagagaacattgtccgctatgatgacgaaggaggaggg
gaagaagacactgaggctttcgatatggctgctctgaggaacctcaacgtcatacgagat
accaagacacggagagacgtaactccagaaattcagtttttctccagaccttcatataaa
agcattccagacaatgttatttttagagagtttatatgggatcgactaaaggaagctgac
atcgatcccagtgctcctccatatgactccctgcagacttatgcttttgaaggcagcggc
tctgttgcagagtcactcagctccttggagtcactgagcacagactcagaccagaattat
gattacctcagtgactggggacctcgcttcaaaaagctggcagacctgtatggaaacaga
gaggacaatgtattctcttag
DBGET
integrated database retrieval system
