Polyodon spathula (Mississippi paddlefish): 121314197
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Entry
121314197 CDS
T07273
Name
(RefSeq) ubiquitin thioesterase otulin-like
KO
K18343
ubiquitin thioesterase otulin [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121314197
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121314197
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
121314197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C101
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
121314197
NCBI-ProteinID:
XP_041103143
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All DBs
Position
4:complement(13225356..13234725)
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AA seq
413 aa
AA seq
DB search
MVRHESCMEEENTADIQALESPDYAGSVVEINVVQSVEDIGEDLTKGGKKTEVEESAVDM
KDTQRTPSIEMEPESQSETQSNVLKPVKSLDEEPMREMSAAVEDEDNTSEVDLYRDAEEI
EEDQLEKNGAKCVDDLIVPHDKCSICPELDMLSYSENEWRGKTAKSALIKKGYEEVYTNF
SGLRRVRGDNYCAMRATLFQVLIQSKETPAWLQREDFIQLPEKLASCYDWMKQWRFTQDN
ENGRLVELLRGHMQLLKRKWLTVVESSSAEERQAVCEEIFRNEEEEYSLLEAVKLLMLNT
AIELHNDMQLDKDVPIFCWLLFARDSSDTPSAFLSNHLNQVGFSGGLEQVEMFLLGYTLE
LTIRVYRLYKFETDEFLTFYPDDHKEDWPAVCLITEDDRHYNVPVQKQDTTRL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcatgagagctgcatggaggaagaaaacactgcagatatacaagcgttggaa
agtccagattacgcgggcagtgttgtggagataaatgtagtacagtctgtggaagacatt
ggagaggatctaaccaaaggaggcaaaaaaactgaagttgaggaaagtgctgttgacatg
aaagacacacaaaggacgcccagcatagagatggaaccagagagccaaagtgaaacccaa
tccaatgttcttaaacctgtgaaatctttggatgaagaacccatgagagaaatgagtgct
gctgtcgaagatgaggataacacaagtgaagttgatctgtatcgagatgctgaagagata
gaagaggatcagctggaaaaaaatggagcaaaatgtgttgatgatttgatagttcctcac
gataagtgcagcatatgtccagaattggacatgttatcatacagtgaaaatgagtggaga
ggaaaaacagccaaaagtgcactgattaaaaagggatatgaagaagtttatacaaatttc
agtgggcttcggagagtgcgaggagataattactgtgcgatgcgggcaacacttttccag
gtgttgatccagagtaaggaaacaccagcctggcttcagagagaagactttatccagctg
ccagaaaagttagcctcatgttatgactggatgaagcagtggaggtttacacaggacaat
gaaaatggacgtttggtggaattgctaagaggacatatgcagcttctaaagagaaagtgg
ttgaccgtggtggaatcctccagtgcagaagagagacaagccgtgtgtgaagagatcttc
aggaatgaagaggaggagtacagtttgctggaggctgtgaaattgctgatgttgaatact
gctattgaactgcacaatgatatgcagctggacaaggacgtgcccattttctgctggctc
ttgtttgctcgggacagttctgataccccctcagcattcctcagcaaccacctcaatcaa
gtgggcttcagtggcggactcgagcaggtcgagatgttcctcctgggctacactctggag
ctgacaattcgtgtgtacaggctttacaaatttgaaacggatgagtttctcacattttac
cctgatgatcacaaagaagattggccagctgtgtgtcttatcacagaggatgacagacac
tacaatgtcccggtccaaaagcaagacacaacaaggttatag
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