Polyodon spathula (Mississippi paddlefish): 121314210
Help
Entry
121314210 CDS
T07273
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00250
Alanine, aspartate and glutamate metabolism
pspa00410
beta-Alanine metabolism
pspa00430
Taurine and hypotaurine metabolism
pspa00650
Butanoate metabolism
pspa01100
Metabolic pathways
Module
pspa_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121314210
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121314210
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121314210
00430 Taurine and hypotaurine metabolism
121314210
Enzymes [BR:
pspa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121314210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
SHMT
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
121314210
NCBI-ProteinID:
XP_041103168
LinkDB
All DBs
Position
4:15405974..15431716
Genome browser
AA seq
550 aa
AA seq
DB search
METPASLIDTLKAEGKHKEDPLWLKTQQHILPSENENRERQSNTETRTTNFSTMYGRDLL
PAKNGEENTKQFLFEVVHILLNYVSKSFDRNTKVLDFHYPHQLKDGLEGFTLELSDNPEN
LEQLLVDCRDTLKYGVKTGHPRFFNQLSTGLDVIGLAGEWLTATANTNIFTFEISPVFIM
MEEILLKKMFEKIGWPSEKGDGIFSPGGSISNLYSVLLARYYRFPEVKMKGMASVPRLVL
FTSEHSHYSIKKTAAVLGIGTENVIFVKCNERGKMIPSELESKIMETEMKGFVPFYVNAT
AGTTVYGAIDPLSEIADICEKYKLWMHVDAAWGGGLLMSRKHSVKLSGIERASSVTWNPH
KLMGAPLQCSAILVREKGLLQLCNQLCADYLFQPDKHYDVSYDTGDKAIQCGRHVDVFKF
WLMWKAKGAAGFEVQVNKCLDNAEYLYNNLKQRVDFKLVFDSKPEHSNVCFWYVPPSLRE
LPNGQERSKRLHEVAPRIKAKMMEEGTAMIGYQPQGENVNFFRCVFSNPATSKADVDFLI
EEIVRLGNDL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccagcaagtttaattgacacactgaaggctgaaggaaaacataaagaggac
cctttatggctaaaaactcagcagcatatcctcccatcagaaaatgaaaatagagaaagg
caatctaatactgagaccagaaccaccaacttttctacaatgtatggccgggacttgttg
ccagcaaagaatggtgaggaaaacactaagcaattcctctttgaagtggtccacatactt
ctaaactatgtcagcaaatcctttgacagaaacaccaaagttctggacttccactatcca
catcagctcaaggacggtcttgaaggatttactttggagctgtctgataatcctgaaaat
ttagaacagcttcttgtggactgcagagacaccttaaaatatggagttaaaacaggtcac
cctcgtttttttaaccagctgtcaactgggcttgatgttattgggttagccggtgaatgg
ctgacagcaactgccaacacaaacatatttacatttgaaatatcaccagtttttataatg
atggaagaaatcctcctcaagaaaatgtttgaaaagattggctggccatcagaaaaggga
gatggcattttctcacctggtggatccatatctaatctttacagtgtgttgctggctcgg
tattaccgttttcctgaggtgaagatgaaaggaatggcttctgtccccagactggtgcta
tttacatctgaacatagccactattccatcaaaaagactgctgctgttctaggaattgga
acagaaaatgttattttcgtcaaatgtaacgagaggggaaaaatgatcccctctgaactg
gaatcgaaaatcatggaaactgaaatgaagggttttgttcctttttatgtgaatgctaca
gctggtactacagtatatggagcaattgatcctctaagtgagattgcagacatttgcgag
aagtacaaactgtggatgcatgttgatgcagcatggggtggtggtcttttgatgtcaaga
aagcactctgtgaaactcagcggcatagagagagccagctctgttacctggaatcctcat
aaactcatgggtgctccacttcaatgttctgccatactcgttcgagaaaagggtctcctc
cagctgtgtaaccagctctgtgcagactacctgtttcagcctgacaaacattacgatgtt
tcctatgacactggagacaaggccattcagtgcggcaggcacgttgacgtctttaaattc
tggttaatgtggaaggctaagggtgcagcagggtttgaagtacaagtcaataagtgtctg
gataatgctgagtacttgtacaacaatctgaagcagagagttgattttaaacttgtattt
gatagcaaacctgagcatagcaatgtttgcttttggtacgttccaccaagtctcagagaa
ttgccaaatggccaagagagaagcaagagacttcatgaggttgccccaaggataaaagca
aagatgatggaagaaggaacagcaatgattggctaccagccacaaggagaaaatgtgaat
ttcttcaggtgtgttttttccaacccagccacaagcaaggcagatgttgatttcctcatt
gaagagatagtgaggctgggaaacgatctgtga
DBGET
integrated database retrieval system
