Polyodon spathula (Mississippi paddlefish): 121314225
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Entry
121314225 CDS
T07273
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pspa01100
Metabolic pathways
Module
pspa_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121314225
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121314225
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
121314225
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
121314225
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
O-Glycan
121314225
BRITE hierarchy
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GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
FlxA
Glyco_transf_7N
Motif
Other DBs
NCBI-GeneID:
121314225
NCBI-ProteinID:
XP_041103190
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Position
1:11988195..12061656
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AA seq
543 aa
AA seq
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MLRRGLLASGFRVALLLVLLCCCLSLIYMLACSPRADDGQVPLPRPNSPTGKEGYQALLQ
EHEEQHRHYISSLKKQISQLKDELQERSEQLKTVQGSLEHGGVGFGAGGVGVGGLMGGDG
GMSDRSRTDLMEFLRSQLSRAEVHAGTKIPTEYAVVPFESFTLQKVYQLETGLTRHPEEK
PVRKDKRDELIEMLETALETLNSPEEEGNTHRRMYSASDFIEGIYRTERDKGTLYELTFK
GDRSHEFKRLVFFRPFGPIMKVKNERVDTSNMQINIIVPLAKRADKFRQFMHNFREVCVR
QDGRIHLTVVYFGKDQVSEVKAILENTSKVVNFKNYTFIQLNEEFSRGKGLDVGARAWKG
NNILLFFCDVDIYFTSEFLNACRLNAQPGKKVFYPVLFSQYNPGLIYGHRDAIPPIEQQL
VIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGEDVHLYRKYLHSNLVVVRTPV
RGLFHLWHEKRCVDELTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKHKTSL
KKT
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggagggggctgctggcttcggggttccgagtggccttgctactggtgctgctg
tgctgctgcctgtcactgatctacatgctggcatgcagcccgcgggcagacgatggtcag
gtcccgctcccccggcccaacagccccacaggcaaggagggctaccaggccctgctccag
gagcatgaggagcagcatcgacactatatcagcagcctgaagaagcagatctcccagctg
aaagatgagctacaggagcgcagtgagcaactcaagaccgtgcagggctccctggagcac
ggaggggtgggctttggggcgggaggtgtcggtgttggggggttaatgggaggggatggt
gggatgagcgataggagccgcacagacctcatggagtttctgaggtcccagctgagccga
gcagaggtgcatgccggcactaagatccccacggagtatgccgtggtgcccttcgagagc
ttcactctgcagaaggtgtaccagcttgagacaggtctcacccggcaccccgaagagaag
cctgtgcgcaaggacaagcgggacgagctgattgagatgctggagacagcgctggagacg
ctcaactcccctgaggaggaagggaacacccaccgccgcatgtattcagcttctgacttc
attgaaggaatctaccgcacagagagggacaaagggactctgtatgaactgactttcaaa
ggtgaccgtagtcatgaatttaaacggctggtgttcttccgcccgtttggtcccattatg
aaggtgaagaatgaaagagtcgacacctccaacatgcagatcaatattatcgtgcctctg
gctaaaagggcagacaaatttcgacagttcatgcacaatttcagggaagtttgtgtccga
caggatgggaggatccacctcactgtggtttattttgggaaagaccaagtgagcgaggtt
aaagcaatactggaaaatacttcaaaggtggtgaacttcaagaactacaccttcatccag
ctgaatgaagagttctcacgggggaaggggctggatgtgggcgcccgggcctggaaagga
aacaacattctcctcttcttctgtgacgtggatatctacttcacctcagagttcctcaac
gcctgcagactaaatgcacagccaggtaaaaaggttttctatccagtccttttcagtcag
tacaatcctggtttaatctacggccatcgtgatgcaatacccccaatagaacagcaatta
gtcatcaaaaaagacacaggattctggagagattttggatttggaatgacttgtcaatat
agatctgatttcatcaatataggtggctttgatgtagacatcaaaggctggggaggggag
gacgtgcacctctaccggaagtacctgcacagtaacctggtggtggtgcggacgccggtg
cgagggctcttccacctgtggcacgagaagcgctgtgtggacgagctgacacccgagcag
tacaagatgtgcatgcagtccaaggcaatgaacgaggcctcgcatggccagctcggcatg
ctggtcttccgacacgagattgaggcccacctgcgcaaacagaagcacaagaccagcctc
aagaagacttga
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