Polyodon spathula (Mississippi paddlefish): 121314244
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Entry
121314244 CDS
T07273
Name
(RefSeq) RAB11-binding protein RELCH homolog isoform X1
KO
K26154
RAB11-binding protein RELCH
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314244
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121314244
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
LisH
PPP2R1A-like_HEAT
HEAT_EZ
Troponin
Motif
Other DBs
NCBI-GeneID:
121314244
NCBI-ProteinID:
XP_041103217
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All DBs
Position
4:17450787..17515003
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AA seq
1217 aa
AA seq
DB search
MATGTSVNPFNLSDSEEEAERRPGRADNQRGSSDGRAGQLSGPLSPQADSEPTGLLSSNR
TSPSVEGVSVAAAAAGGGAEVRVPVDVIAAQLLRDQYVLTALEFHTELLEAGRELPRLRD
YFSNPGNFERQSGTPPACKDQGFGQSGQLNRAGSISTLDSLDFARYSDDGNRETDERVAV
LEFELRKAKETIQSLRANLTQAAESEVPTQERKNYKSSPEIQEAIRPLEKRALNFLVNEY
LLKNNYKLSAITFSDENDDQDYELWDDVGLNIPKPPDLLQLYRSCGSHQTASRDAADTAV
REKLGELEVLATTKEALHTAEQMQQHTVVKELEYQINLLNSEKHLLAEQIKKLQGEIDAL
KIKSLTAPSFVSESGKPTSDQVPHPVPVDNGQYLDIIGPDGDSRTAQRDHIPNSIGTNTN
THSDLPTAETLSAHYRKLKNQSSRSKASVQFDQPNRKLSPAFHQALLSFCQMSADSRLGS
EVSRIADSEESVTLMLGRCLPHIVPNVLLAKRERMVVHLCQELIPLILCTACLHPEPKER
DQLLHILFNLIKRPDDEQRQMILTGCVAFARHVGATRVEAELLPQCWEQITHKYPERRLL
VAESCGALAPYLPKEIRSSLVLSMLQQMLTEDKADMVREAVVKSLGIIMGYIDDPDKYTQ
GFELMLMALGDPSERVISAIHQVFIPAFAAWTTELGSLQSQLIPTLLSRIEKLLREGEHG
LDEHKLHIYLSALQSLIPALFAVVIQNAPFTNIAKLHGEVLPIEVTRFPRPASPLQDVAT
IVGSREQLAVLLQLYDYQLEHEGTTGWESLLWVVNQLLPQLIEIVGRINVASTTCVHEFS
KFFWRLCRTFGKIFTNTKVKPQFQEILRLSEENIDATAGNGILTKATVPIYATGVLTCYN
QEEDRKLLVGFLEDVMTTLSLSHAPLDSLKASFVELGTGLLRCSNSFRETSCQQAAGANP
AYHELLLTVLWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPEISV
RIATIPAFGTIMETVTQKELLERVKMQLASFLEDPQYQDQHSLQMEIIKTFGRVGPNAEP
RFRDEFVLPHLHKLALGNNMQTVESKRQDIAMQLFEAYSALSCCFISEELMVNHFMPGLR
CLRTDMEHLSPEHEVILNSMIKECEQKVENKSVQEPQGSMSIAASLVSEDTKAKFLNKMG
QLTTSGAMLANVFQRKK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggcaccagcgtcaacccgtttaatctcagcgactccgaggaggaggctgag
cggaggccgggcagagctgacaaccagcggggctctagcgatggacgggcggggcagctg
agcggacctctctcgccgcaagctgactctgagccgacaggtctgctgtccagcaatagg
acgagtcccagtgtggaaggtgtttctgtggctgctgcagctgcaggaggtggtgcagaa
gtccgggtgcctgtggacgtgatcgctgctcagttgcttcgggatcagtatgtcctcacg
gctcttgagttccacaccgagctgttggaggccggcagggagctgccccgtctccgggat
tacttctccaacccgggtaactttgagaggcagagtgggaccccacccgcttgcaaggat
cagggattcggacagtctggacagctcaaccgagccggcagcatcagcactctggactcc
ttggactttgcacggtattctgatgatggaaaccgagagacagatgagcgtgtggcagtc
ctggagtttgaactacggaaagccaaggagaccattcagtcccttcgtgccaacttgact
caagcagcagagagcgaagttcctacacaagaacgaaagaattataaatcgagtcctgaa
attcaggaagcaatccgacctcttgaaaaaagagcactgaactttcttgtgaatgaatat
ttattaaagaataattacaaactctcggcaatcacgttttcagatgaaaatgacgatcag
gattatgagctgtgggacgatgtcgggttgaacattccaaagcctccagacctgctccag
ctttaccggagctgcgggagccaccagaccgcctccagggacgcggccgacactgctgtc
agggagaagcttggggagcttgaggttctcgccaccaccaaagaggcccttcacactgcc
gagcaaatgcagcaacacaccgtagtgaaggagctggaataccagatcaatctcttaaac
agtgaaaagcatcttttggctgaacagatcaaaaagcttcagggtgaaatagacgccctt
aaaataaagagcctcactgctccgtcgtttgtatcagaatcagggaagccaacgtcggat
caagtgcctcaccctgtccctgttgacaacggacaatatctggacatcataggccctgac
ggggacagcagaactgcacagcgagatcatatccctaattccattgggactaacacaaac
acacactctgacctccctactgctgaaacactgtccgcacactacagaaagttaaaaaat
cagtcatcccggagcaaagcatctgtacagtttgatcaacccaacagaaagctgtcccct
gcattccatcaagcactgctgtctttctgtcaaatgtcagccgacagccgcctaggctca
gaggtgtcccgtattgcagacagtgaagagagcgtcacgctgatgctggggcgctgctta
ccacacattgtgcccaacgtgcttctagcaaaacgggagagaatggttgtgcatctttgt
caggagttgatcccactgattttatgtacggcctgccttcaccctgagcccaaggagaga
gatcagcttctgcacattctcttcaatctgatcaagaggccggatgatgagcagagacag
atgatcttgacgggatgtgtggcatttgcacgtcatgttggagcaacgcgtgtcgaagct
gagcttctgccgcaatgctgggaacaaatcacccacaagtacccggagagaagactgctg
gtggcagagtcttgcggagcccttgcaccttatttgcctaaagagattcgcagctcgctg
gtgctctcaatgctccagcagatgctgacagaagacaaggcagacatggtccgagaagct
gtggtcaaaagcctcggcatcatcatggggtatatcgatgacccagataaatatacccag
ggcttcgagctcatgctgatggccctgggggacccctcagagagggtaatcagtgcaata
caccaggtgttcatcccagctttcgctgcctggaccacagagctgggcagcctgcagtcc
cagctcattcccacactgctcagcaggattgagaagctgctcagggaaggagagcacgga
ctagatgaacataagctccacatttacctttctgcactccagtcactgatccctgccctg
tttgcagtggtgatacagaatgcccccttcacgaatatagccaagctccatggagaagtg
ctgcccatagaagttaccaggttccctcggccagcctctcctctccaggacgtggccacc
atcgtcggcagcagagaacagctggcggtgctacttcagctctacgactatcagctggag
cacgaggggaccaccgggtgggagagcctgctttgggtggtcaaccagctgctgccgcag
ctcatagaaatagttggcaggatcaatgttgcttccacaacttgtgtccatgaattttcc
aaattcttctggaggttgtgtagaacgtttggaaaaatctttacaaatacaaaagtgaaa
ccacagttccaagaaatcctccggctttctgaagaaaacattgatgccacagccggaaac
ggcatcctaacaaaggcaacagtacctatctatgcaacaggtgtcctaacgtgctataat
caggaagaagaccgcaagctattggtgggattcttggaggatgtcatgacaaccctttct
ttgtcgcatgcgcctcttgacagcctaaaagcttcatttgtggagctggggacgggcctg
ctgagatgtagcaactcattcagggagacatcttgtcagcaagcagcaggtgccaaccct
gcataccacgagctgctcttaacagtcctgtggtatggagtagtccacacatcagcactg
gtgcgctgcactgctgcaagaatgtttgagctgttggtgaagggggtgaatgaaactcta
gtagctcagagagttgttcctgcacttattactctctccagtgacccagaaatttctgta
aggatagctacaataccagcatttggtacgatcatggagacagttacgcaaaaagagctg
ttggaaagagtgaagatgcagctggcctcctttttggaagacccccagtatcaggatcag
cattctttgcagatggagatcatcaaaacatttggaagggttggaccaaatgctgagccc
aggttcagggatgaatttgtgcttcctcatttacacaagctggctcttggtaacaacatg
cagactgtggaaagcaagaggcaagacatcgccatgcagctctttgaagcctacagtgca
ctctcctgttgctttatttcagaagaattgatggtcaaccattttatgccaggtctgagg
tgtctaagaactgacatggaacatctttcccctgaacatgaggttattttaaattccatg
ataaaggaatgtgagcagaaggtggaaaacaagtcagttcaggaacctcaaggttcaatg
tccattgctgcaagtcttgtgagtgaagacacaaaggccaagttcctcaacaaaatgggt
cagctgaccacctctggggccatgttggccaatgtattccagaggaaaaagtga
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