Polyodon spathula (Mississippi paddlefish): 121314253
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Entry
121314253 CDS
T07273
Name
(RefSeq) cullin-1 isoform X1
KO
K03347
cullin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04110
Cell cycle
pspa04114
Oocyte meiosis
pspa04120
Ubiquitin mediated proteolysis
pspa04141
Protein processing in endoplasmic reticulum
pspa04310
Wnt signaling pathway
pspa04340
Hedgehog signaling pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121314253
04120 Ubiquitin mediated proteolysis
121314253
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121314253
04340 Hedgehog signaling pathway
121314253
04350 TGF-beta signaling pathway
121314253
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121314253
04114 Oocyte meiosis
121314253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121314253
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
121314253
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
121314253
NCBI-ProteinID:
XP_041103236
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Position
4:18311787..18344002
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AA seq
781 aa
AA seq
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MSSNRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QARGAGVPPSKPSKKAQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFESQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAA
LNVSTSDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS
SKSPELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLV
HQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDF
SIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCF
KNRYTLQASTFQMAILLQYNTEDIYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDEN
ANVDEVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAI
VRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYL
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaacagaagccaaaacccacatggtttgaaacagattgggctggaccagatc
tgggatgatctccgagcagggatacagcaggtctacaccagacagagcatggcaaagtca
cgttacatggaactctacactcacgtttataactactgtaccagtgtgcatcagtcgaac
caggctcgaggtgctggggtccctccttcaaaaccttccaagaaggcacagacccccgga
ggggcgcagtttgtgggactggaactctacaagcgactgaaggagttcctcaagaactac
ttgacaaatcttctcaaggatggggaagatctgatggacgagagtgtgctaaagttctac
acccagcaatgggaagattacaggttctcaagcaaagtactgaacggtatctgtgcctac
ctcaaccgacactgggtccgccgcgaatgtgatgaaggacgcaaaggaatctacgaaata
tactcgcttgccttggtgacatggagggaatgcttatttagacctttaaacaaacaggtc
acaaatgcagtattgaagctgatagaaaaggaaagaaatggagaaaccatcaacactaga
ttgatcagtggtgttgtccagtcctatgttgaacttggtttaaatgaggacgatgccttt
gcgaagggacccacattgtccgtgtacaaagaatactttgagtctcagtttttggcagac
acggagcggttctatacaagggaaagcacagagttcttgcaacaaaaccctgtcacagag
tacatgaaaaaggcagaggcgcgcttgctggaagagcagcgccgggtccaggtctatctg
catgaaagcacgcaggatgagctggcgaggaagtgtgagcaagtgctgatcgagaagcac
ctggagatctttcacacagagttccagaacttgttggatgctgacaaaaatgaagatttg
ggccggatgtacaaccttgtgtccagaatcacagatggtctgggagagctgaagaaactt
cttgagacacatattcacaaccagggactagctgccattgagaagtgtggggaagccgct
ctcaatgtaagtacttcagatcccaaaatgtatgtacagactattttggatgttcataag
aagtacaatgcactagtaatgtcagcattcaacaatgatgctggttttgtagctgcacta
gacaaggcttgtggtagattcatcaacaacaatgcagtgacaaagatggctcagtcatca
agcaaatcccccgagctcttggcaagatactgtgactccctattaaagaaaagctccaag
aacccagaagaagccgagctggaagataccctgaatcaagtgatggttgtctttaagtac
atcgaggacaaagatgtgtttcaaaagttttacgccaagatgctggcgaagagactggtg
catcagaacagtgctagtgacgatgcggaggccagcatgatctccaaacttaagcaagcc
tgtggctttgaatacacttccaaactgcagcgaatgttccaggatattggagtcagcaaa
gacttaaatgaacagtttaaaaaacatctgtccaactctgaaccattagacttggatttt
agtattcaggttctaagctcaggctcttggcccttccagcagtcctgcacatttgcttta
ccttctgagttggagaggagttaccaaagattcacagccttttacgccagcagacacagt
ggacgcaagctaacctggctctatcatctgtccaaaggagagctggtcacaaactgtttt
aagaatcggtacactttgcaggcatccacgttccagatggcaatcctcctgcagtataac
acagaagacatatacactgtacagcaactgacagacagcacgcagattaaaatagacatt
ctggttcaagttttacaaatcttgttaaagtccaaattgctggtattggaagatgaaaat
gcaaatgttgatgaggtggagtttaagccagacactttaataaaacttttccttggatat
aaaaataaaaaactgcgagtcaacatcaacgtgccaatgaaaactgaacagaaacaggag
caggaaactactcacaagaatatcgaggaggacaggaaacttctgatacaggctgccatt
gtgagaatcatgaagatgaggaaagttttaaaacaccagcaacttcttgcagaggtacta
aaccagctgtcctccagatttaaacccagggttcctgtgataaagaaatgcatcgacata
ctgatagagaaggaatacttggaacgtgtcgatggggaaaaggatacttacagctacttg
gcttaa
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