Polyodon spathula (Mississippi paddlefish): 121314295
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Entry
121314295 CDS
T07273
Name
(RefSeq) chondroitin sulfate glucuronyltransferase-like
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pspa01100
Metabolic pathways
Module
pspa_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121314295
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121314295
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
121314295
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
O-Glycan
121314295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
121314295
NCBI-ProteinID:
XP_041103326
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All DBs
Position
4:20152609..20161798
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AA seq
765 aa
AA seq
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MRLSSLLALFRPALPLILGLSLGCSLSLLTVSWTQGDTDEPCGDGLVNGGLFAGNQGHNT
KGGNEAGGENEDFQPHIVPYYRDPNKLHKKVFRTRYIHTELGIRERLLVGILTSRATLTT
LAVAVNRTVAHYFHKTFFFTGVRSPKIPHGMQVVAHGDDRPVWLMYETVRYLHQHFGGDY
DWFYLAQDDTYTQAERLSQLVSHLSAGQDLYLGRAEEFIGGDEHARYCHGGYGYLLSRSL
LARLQPHLDTCRNDILSVRPDEWLGRCIIDSLGLSCVEVHQEMQYRYFELGKNADPERED
SAAFKNAFTVHPVSDPTLMYRLHKRFSQIELERTNLQIQQLQLQIGNLSSLTPEGKAGTT
WPIGINSPFKPKTRFEVINWEYFTEEHIYPCIDGAPKCELRGADQADVSDVVETAVKRLN
EHYQPVLRFRKQRLLNGYRRFDPTRGMEYTLDLALEAFTQKGHSQVIAKRVGLLRPLSSI
EIIPMPYVTEATRVQVILPVTAHEQDYVGNFLDMYVMNALDTHDNVLLTFLFIYEPFDAQ
MVSQNDVFAGIKSMIGEVEKRYADVKILWISVKTEVPSQVKLMDIISKKHPVDTLFFLAS
VWTEVNTDFLNRCRMNAISNWQVFFPIHFQEYSPAIVYRDQQPSVASSSAAESLKDGHFD
RYVFEEACFYNADYMAARTKMAADILDNDEMLESMDVYEMFIHYSSLHVFRAVEPALMQK
YIRRTCNPRFSEDIYHRCVLSNLEGLASRSHLAMALFEQEQANST
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtcctccctcctggccttattcaggcctgcacttcctttaatcctggggctt
tccttggggtgcagcctcagtctgctgaccgtgtcctggacacagggggacactgatgaa
ccctgtggggatgggcttgtaaatggagggctgtttgctggaaaccagggacacaacact
aaaggtggcaacgaggcaggtggagagaatgaagatttccagccacacattgttccttat
tacagggaccccaacaaactgcacaaaaaggtctttaggacgcggtacatccacacagag
ctgggtatacgagagcgccttctagtgggaatcctgacatcacgggccacgctgaccacg
ctggcagtggcggtgaaccgcacggtggcacactacttccacaagaccttcttttttaca
ggggttcggagccccaagataccccacggcatgcaggtggtggctcacggggacgatcgg
cctgtctggctgatgtatgaaacggtgcgctacctccaccagcacttcgggggagactat
gactggttctacctggcgcaggacgacacttacacgcaggcagagcggctaagccagctg
gtgagccatctcagcgccgggcaggacctgtacctgggacgcgctgaggagttcattggt
ggagacgagcacgcccgctactgccacggaggctatggctacctgctgtcccgcagccta
ctggcccgcctgcagccgcacctggacacctgccgtaacgacatcctgagtgtgcggccc
gacgagtggctcggccgctgcatcatcgactccctggggctgagctgtgtggaggtgcac
caggagatgcagtatcggtattttgagcttgggaagaacgctgaccctgaacgcgaggac
agtgctgcatttaaaaacgccttcacagtccatcccgtctccgaccccacgctgatgtat
cggctgcacaagcgcttcagtcagatcgagcttgagaggaccaaccttcagatccagcaa
ctacagctccagatcggtaacctcagttcgttgacaccagaggggaaggcagggaccacc
tggcccattggcatcaactctcccttcaagcccaaaacccgttttgaggtgattaactgg
gagtacttcacagaggaacacatctacccctgcatcgatggggctcccaagtgtgaacta
cggggggcagaccaggcagatgtaagtgatgtggtggagacggctgtgaagaggctgaac
gagcactaccagcccgtcctgcgctttcgcaagcagcgtctgctaaatggctaccggcgc
ttcgaccccacacggggcatggagtacaccctggacttggccctggaggccttcactcag
aagggacacagccaggtgatagccaaacgggtgggcctcttgcggccgcttagctccatc
gagatcatccccatgccctacgtgacagaggccaccagggtgcaggtcatccttcctgtc
acggcccacgagcaagactacgtgggtaacttcctggacatgtacgtgatgaatgctctg
gacacccatgacaatgtgctcctgaccttcctcttcatctacgaacccttcgatgcccag
atggtcagccagaatgatgtctttgctgggatcaagtccatgattggcgaggtggagaaa
cgatatgcagatgtcaagatcctctggatcagcgtcaagactgaggtcccctctcaggtc
aaactgatggacatcatttccaagaagcaccccgttgacactctgttctttctggctagt
gtctggacagaagtcaacaccgacttcctcaacaggtgccggatgaacgcaatcagcaac
tggcaggtcttcttccctatccacttccaggagtacagcccagccatcgtgtatcgtgac
caacagccctctgttgcttcctcctcggccgccgagtcgctgaaggatggccattttgac
cgctacgtctttgaagaggcctgcttctacaacgcagactacatggctgcacgcaccaag
atggcggccgacatcctggacaacgatgagatgttggaaagcatggatgtctacgagatg
ttcattcactactccagtctacacgtcttccgtgctgttgagcctgctctgatgcagaag
tacatccgcagaacgtgcaatcctcgcttcagtgaggacatctaccaccgctgcgtgctg
agcaacctggaggggctggcctcccgatcacacttggctatggccctgtttgaacaggag
caggccaacagcacttaa
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