Polyodon spathula (Mississippi paddlefish): 121314297
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Entry
121314297 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family F member 2
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121314297
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121314297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA
MMR_HSR1
AAA_22
AAA_28
RsgA_GTPase
AAA_24
AAA_16
VapE-like_dom
NACHT
AAA_33
AAA_15
AAA_30
AAA_25
AAA_23
Dynamin_N
tRNA-synt_His
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
121314297
NCBI-ProteinID:
XP_041103331
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Position
4:complement(20136995..20152521)
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AA seq
608 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKARQRPKKGEEENGEVEQQESQENGVKVDEMASLTKGIDEFEL
KKTEARAVTGVLASHPNSTDVHIISLSLTFHGQELLTDTSLELNSGRRYGLIGLNGTGKS
MLLSAIGHREVPIPDHIDIYHLTREMPPSEKTALECVMEVDQERIVLEKEAERLAHEDAE
CEKLMELYERLEELDADKAEVRASRILHGLGFTAAMQRKKMKDFSGGWRMRVALARALFI
KPFMLLLDEPTNHLDLDACVWLEEELSSFKRILVLISHSQDFLNGVCTNIMHLQNRKLKY
YTGNYDQYIKTREELEENQMKRYNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLQK
MVASGLTERVVNDKTLSFSFHPCGKIPPPVIMVQNVSFRYAQDGPLIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLAGEVLPSDGMIRKHSHVKIGRYHQHLTEQLELDLSPLDYMMK
CYPEIKEREDMRKIVGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTN
HLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRGILAYKEHL
KSKMIRDP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgatctggcaaagaaaaaggcagccaagaagaaggaagcagccaaggctcgc
cagcggccgaagaagggtgaggaagagaatggcgaggtggagcagcaagaaagccaggag
aacggggttaaagtcgatgaaatggcaagtctgaccaagggaatagatgaatttgaactt
aagaagactgaagcacgagctgttactggtgttttggcctcgcatcccaacagcacagat
gtgcatatcatcagtctctctctaactttccatggacaggagctgctcactgacaccagt
ctggagttgaactctggcaggcgctatggactcatagggcttaacggcacaggtaaatcc
atgttactgtctgccattggtcaccgtgaagtaccaatccctgatcacattgatatctac
catctcactcgtgagatgcctcccagtgaaaagactgcccttgagtgtgtgatggaggtg
gaccaggagagaattgtactggagaaagaagcagaaaggcttgcacatgaagatgcggag
tgtgaaaagctgatggaattgtatgagcgtctggaggagctggatgcagacaaggcagaa
gtgagagcctcgcgcatccttcacggtctgggctttactgcagcaatgcagagaaagaaa
atgaaggacttcagtggtggctggagaatgagagttgcccttgccagagctctgttcata
aagcctttcatgctgttgctagatgagcccacaaaccatctggatctggatgcctgtgtg
tggctagaggaggagttgagttcttttaagagaattctagtactgatctcccattcgcag
gactttcttaatggtgtttgtaccaacattatgcatctgcagaatagaaaactcaagtat
tatacgggaaactatgatcagtacattaagaccagggaggaactggaagagaatcagatg
aaacgttacaactgggagcaggaccagatttcacacatgaagaactatattgcacgattt
ggtcatggctctgctaagctagccagacaggcccaaagtaaagagaaaaccttgcagaaa
atggtggcatcgggtttgactgagcgagtggtaaatgacaagactctgtcatttagtttt
catccttgtgggaagattcctcctccagttatcatggttcagaatgtcagctttagatat
gcacaagacgggccactgatctacaaaaaccttgagttcggtattgatttggacacgagg
gtggctctggttggtcccaatggagctggaaagtctacgttgctcaagctgcttgcagga
gaggtgcttccatcagatggcatgatcaggaaacattctcatgttaagattggcaggtac
catcagcatttaacagagcaattggagttggatctgtctcctctagactacatgatgaaa
tgctacccagaaatcaaagagagggaggacatgaggaaaatcgttggtagatacggactc
actggtaaacagcaggtaagccctatccgaaacctgtctgacggtcagaaatgccgggtg
tgctttgcatggctggcctggcagaaccctcacatgctgttcttggacgaacctacaaat
cacctggatattgagactattgatgcactggctgatgccatcaatgagtttgaaggagga
atgatgctggtcagccatgacttcaggcttattcagcaggtggctcaggagatctgggtt
tgtgagaaacaaaccataaccaaatggaacagaggcatcttggcgtacaaagagcacttg
aaatccaaaatgatacgtgatccctga
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