Polyodon spathula (Mississippi paddlefish): 121314298
Help
Entry
121314298 CDS
T07273
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121314298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121314298
03036 Chromosome and associated proteins [BR:
pspa03036
]
121314298
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121314298
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121314298
PBAF complex
121314298
GBAF(ncBAF) complex
121314298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
121314298
NCBI-ProteinID:
XP_041103333
LinkDB
All DBs
Position
4:complement(20173648..20248518)
Genome browser
AA seq
489 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPSVRPGM
PNTVIEPTRKRPASSQQVQQQQAAQNRARNAKRRKMADKILPQRIPGDHRRNRVFCKIRE
LVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDADD
SDGSIASWELRVEGKLLDDPSKLKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQE
TDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYVKTN
KLQDSHEKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKK
TACYDIDVEVEDPLKGQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSK
DPKGYIQDWLKSQSRDLKVMTDVVGNPEEERRAEFYQQPWSQEAVNRYFYCKIQQRRQEL
EQALAVRNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaggagactgcaggaggagcccgaaaagctaccaaaagcaaactctttgag
ttcctagtccatggcgtgcgtccagggatgccctctggagcccgaatgccccatcaaggg
gcccccatgggccctccaggaccaccatatggggggagtccctctgttcgccctgggatg
ccaaacacagttattgagcctacaagaaagcgtccggcctcctcccagcaggttcaacaa
cagcaggcagcacagaaccgagccagaaacgccaagaggaggaaaatggcagacaagatt
ctccctcagaggattccaggggatcacagaaggaacagggtgttttgcaagatccgtgag
ttggttccagagtcccaggcctacatggatctcctggctttcgagcgaaaactggaccaa
actattatgaggaaacgggtggacatccaggaggctttgaagagaccaatgaagcaaaaa
cgtaagctgaggctgtacatctccaatacttttaaccctgcaaaaccagacgctgatgac
tctgatggcagcattgcttcctgggaactgcgagtggaggggaaactactggatgatcct
agcaaactgaagaggaagttctcctcgttcttcaagagcctggtgattgaactagacaag
gacttatacggtcctgacaaccacctggtggagtggcacagaaccccaaccacccaggag
actgatggcttccaggtgaagcggcctggtgatgtcagcgtgcgctgcactctgctgctg
atgctggactaccagcccccccagttcaagcttgacccaaggctggcccggttactgggg
atccacacccagacacgctccgccatcatccaggcactgtggcagtacgtcaagaccaac
aagctgcaggactctcacgaaaaggagtacatcaactgtgacaagtacttccagcagatc
ttcgattgcccaaggctgaagttctctgagatcccccagcggctcactaacctgctgcta
ccccctgaccccatcgtcatcaaccatgtcatcagcgtggacccaaacgaccagaaaaag
acggcttgctatgacatcgatgtggaggtggaggaccctctgaaaggccagatgagcagc
ttcttgctctccacagccaatcagcaggagattgcatcactggacaacaagattcacgaa
acaatcgagtccatcaaccagctgaagattcaaagagactttatgctgagtttctccaag
gaccccaaggggtacatccaagactggctcaaatcccagagccgggacctcaaggtgatg
acagatgtggtggggaacccagaagaggagaggagggcagagttctaccagcagccctgg
tcccaggaggcagtcaaccgatacttctactgcaagattcaacagcgcagacaggagcta
gaacaagcactggccgtgcgcaacacctaa
DBGET
integrated database retrieval system
