Polyodon spathula (Mississippi paddlefish): 121314309
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Entry
121314309 CDS
T07273
Name
(RefSeq) ALS2 C-terminal-like protein isoform X1
KO
K26227
ALS2 C-terminal-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314309
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121314309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MORN
VPS9
Motif
Other DBs
NCBI-GeneID:
121314309
NCBI-ProteinID:
XP_041103353
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All DBs
Position
4:21598247..21635114
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AA seq
1020 aa
AA seq
DB search
MKIAGNLSFLLPVLMSHPGNSSQRSTSFSPLFSSSSPAPAGSQFKEKSAARSLVETDKAF
LDYLADINTSVLQHLLHHNTVDQKWHSQKTQLLKLNEKFHALWDQTGETCKTLKQFIQQD
KPVSLQDIYIISNKTRVLEVYIQYFSSFTNFVVVGGFDYLAKNTCSYFKKNKVNLNTFLT
NSQKAENSVSLYRILHERIREQVNQYTLILTRLHETTYKNAGSEGISDALKGFVDLQKYI
SQVLDEASVTKALWKSLERKVTDILRTPERRIREESRNIPISVSPGRSSHDRILLFDDVL
VLHRGSDVHCYDLTTLWIEFTTEENSNRRILKVTSPEESFTLSAKEPQHEAVWQWKLNQA
IRQCLAGKRDFPLWGKGVDGHSPSSTPTSRFSAYTFKNEGRLRNAVYEGHWNKGVPHGKG
TLRWDDERNYTGDFRDGKEHGFGVCVIPQKETEGYDCYKCHWKDGRMHGYGICEYNNNTV
YRGYFKDNVRHGFGILEGSRTDSNPLRYIGQWENDKKTGYGVWESINSGESYRGMWLEDQ
RHGHGIVVTQSGLCYEGIFISDKLTGKGILLSEDNSLYEGEFTEDLMLKGKGKLTFPNGF
TLEGVFSSKFGNGLQATGILKTPGNEEKAESAAQLQMGLHGLPVEKRWTGIFEPFVEYLQ
AGFTEESDESFLGFHIETGRTMRKTSNNNNGAGIIAETHTEESTEYLFCNRKSEEFSANN
DFIENLKKKSDYVLLQQYLEKSFQCAKHPLGKILQTQALVFQATYSGMGANKHLLTMAQD
EVKYLAKKLLEIIRDYLPESFNKESEDKETRNEMNCYTLVLPLILPKFYPELSMLYMLYH
EKGDALYWQGIVHLGLLSDAKLLDFLDVQKHLWPLKDLQLTANQRYSFVNNQCFHSAIEC
FQKVSTTADPLEKMHTLFRTFEEIEKTVSWVLDREYKLPMDDLLPLLIYVVSRARYICAR
VLNPGWLSQGIQHLGAELHFIRDMMDPCGIGGMYDFLLTALESCYQHIQKEDKRLDEFPD
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctggcaatctcagcttcctgctgccagtcctcatgtcgcatcctggcaat
tccagccagcgctccacaagtttctcccctctgttctcttcctcttcacctgccccagcg
ggatcccagttcaaagaaaaatctgctgccagatccctggtggagactgacaaggcattc
ctggactacttggctgatataaacacaagtgtcctccagcatctcctgcatcataataca
gttgatcagaaatggcacagccagaagacgcagctcctgaagttgaatgagaaattccac
gcgctttgggaccagacgggagagacgtgtaaaacattaaagcagtttatacaacaagac
aagcctgtcagtctccaggacatttacatcatcagcaacaaaacaagagtcctggaagtc
tacatacaatacttctcgtcttttacaaactttgtggtggtcggagggtttgactatctc
gccaaaaacacatgcagttattttaagaagaataaagtgaacctaaatacatttctcacc
aattcacaaaaagcagaaaactcagtcagtttgtacaggatcctccatgagcgaatcaga
gagcaggtgaaccaatacaccctcatcctcacacgattgcacgagacaacgtataagaat
gcaggcagtgaaggcatcagcgatgctctcaagggatttgttgacctacagaagtatatc
agccaggttctggatgaggcctccgtcactaaggccctgtggaaatcactggaacgcaaa
gtaacggatattttgcgcacccctgagcgcaggataagagaagaaagcagaaacattccc
atctcagtctctccaggaagatccagtcatgacagaatattgctcttcgatgatgttttg
gtattgcatcggggatctgatgttcactgttatgatctcactactctttggattgagttt
acaacagaagagaactccaacagaaggatcctgaaggtgacctctccagaagaatcgttc
acactaagcgctaaggagccccagcatgaggctgtgtggcagtggaagttgaatcaagcc
attcgccagtgcttggctgggaagagggactttcccttgtggggtaaaggagtcgatggg
cacagtcccagcagcacccccacctctcgcttttctgcatacacatttaaaaacgaagga
aggttaagaaatgcggtttatgaaggccactggaataagggggtgccacatggcaaaggt
acattaagatgggatgatgaacggaactacactggggacttccgagatggtaaagagcat
gggtttggagtctgtgtcattcctcagaaagagacagaagggtatgactgctacaaatgt
cactggaaagatggaagaatgcacggatatggaatctgtgagtacaacaataacacagtg
tacagaggttatttcaaagacaatgtgcgccatggctttgggattttggaaggctccaga
actgacagcaatccattaagatatattggccaatgggaaaatgacaagaaaactggatat
ggagtctgggaaagcattaacagtggggagagctatcgtggaatgtggctggaagaccaa
agacatggacatggaattgtggtcactcagtccggcttgtgctacgagggaatcttcatc
tctgacaaactgacaggcaaagggattttgctttctgaagacaattctctttatgaaggg
gagtttaccgaagacttgatgctcaaaggaaaggggaagttgacatttccaaatggtttc
acacttgagggggttttcagcagcaaatttggaaatggcttacaggcaactggcattttg
aaaacacctggcaatgaagagaaagcagaatcagctgctcaactacagatgggattgcat
gggctgcctgtcgagaagagatggacaggcatctttgaaccatttgtggagtaccttcaa
gccggctttaccgaagaatcagatgagtccttcctcggtttccacatagagactggcagg
actatgagaaagacttccaacaacaataatggtgcagggataatagcagaaacccatact
gaagaaagtacggaatatctgttctgtaacaggaaatctgaggaattctctgcaaataat
gacttcatagaaaacctaaaaaagaagtctgattatgtactgctacaacagtatttggaa
aagtccttccagtgtgccaagcaccccttgggaaagattctgcaaactcaggccttggtg
ttccaggccacctactctgggatgggtgccaataagcatctactgaccatggcccaggat
gaagtcaaataccttgcaaaaaaactattggagatcatcagggattacctccctgagtca
ttcaacaaggagtctgaagacaaagagacaaggaatgaaatgaactgttacactctggtg
ctgccgctgatcttgcccaagttctaccccgagctctccatgctctatatgctgtaccat
gagaagggcgatgccctctactggcagggcattgtgcacctcggcttgctgtcggacgct
aaactgctggattttctcgatgtacagaagcatttatggccgctaaaggaccttcagttg
actgcaaaccagagatattcctttgtgaacaatcagtgcttccattcagcaatcgagtgc
ttccagaaagtaagcactacagcagaccctctggaaaaaatgcacactctgttcaggacg
tttgaagagattgagaagactgtgtcctgggttctggacagggagtacaaactgcccatg
gatgacctgctgcctctgctcatttatgtggtgtccagagcaaggtatatctgtgcaaga
gtccttaatcctgggtggctcagtcaagggattcagcacttgggggcggaactccatttc
atcagggacatgatggacccctgtggcattggagggatgtatgattttctattaactgca
ctggagtcatgttaccagcacatacagaaagaggataagagactagacgaattcccagac
tga
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