Polyodon spathula (Mississippi paddlefish): 121314324
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Entry
121314324 CDS
T07273
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121314324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314324
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121314324
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
121314324
NCBI-ProteinID:
XP_041103383
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All DBs
Position
4:complement(22911992..23132701)
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AA seq
1336 aa
AA seq
DB search
MLVLNGGPSGVTPMKPGSLQRSRTVYCISVTLIRGEQGRLGEAGKDDAQPASAADRIASW
EQQGVCLVSGGSSGHRSPSGAPFKLCLNTDFGGGTRSDCVNAGEEKMKEDRFTEQSNTLK
NLAEATLSSTLQEWHWNDCRSVGQDDPGDLFLLDSPPLPEQQWQNSACSSSPGQVKLRRA
LQSHLPHDRRAVSMYSFPSKVESALRATQTKQGRPKSICVVAGGRTVAGFISEPTSPLSQ
PHSTVSSLIELFRQQKVKEVDLHGGTTGNAKKNPVEATKVLVIPQEVSLRQRPKDKHRTV
SMSFLEINKLVPRVEQLGSEDDLESESSSVFSRTSIGSSFLRSGFRWKMFGKSAGEDGRS
PQQGTKEESPKRTLASFRRSLSFRIRRGLNKGGSKEPNGRVRAKSDGDANLYPQRPFSYL
NGGLLPPLPGKTGSPTEESVFHYMRYQSKEKLRVLEIPVNPKLSKPSTDEPSVWRLLTER
FRKKEQSPPDKSEINTEPVKIPLARKKRPELVDIETLTGTQRSGTQDSFVNSQEWTLSRS
VPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIIVDGQSYLLLIRDEGGP
PELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISAANPR
VIDDSRARKLSNDLKRCTYYETCATYGLNVERVFQDVAQKVVALRKKQQLSIGPCKSLPN
SPSHSSVPSSSSIPSVHINQATNGSGGFNDYSSSVPSTPSISQREMRIETIAASNTPTPI
RKQSKRRSNIFTSRKASEQAKSMDCKTDNIGSGRAIPIKQGILLKRSGKSLNKEWKKKYV
TLCDNGVLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVATTAPTASPKTNGLMK
DRSNLQLMPGNSGAPHSTSSSSLQSERSVSGINLVAYSAKPDGMHQRSFSVSSADQWSEA
VITPSSGTGAANGTADSLCSSPIVSCTTSPKLDPPPSPHANRKKHRRKKSTGATKPDGPT
TGNEEQEESFEFNIVSLTGQMWHFEASTYDERESWVQAIESQIFASLQSCESSKNKSRLG
SQSDAHTIQSIRNVRGNSFCVDCEGPNPDWASLNLGALICIECSGIHRNLGTHLSRVRSL
DLDDWPVELSMVMTAIGNALANSVWEALVEGYTKPTSDSSREEKECWIRAKYEQKLFVAS
LPQSDVPLGQQLLRAVVEDDLRLVVLLLAHGSKEEVNETYGDGDGRTALHLSSAMANVVI
TQLLVWYGVDVKSRDAHGLTPLSYARRAGSQECIDILIQHGCPNDNFIPIPTPNLSRRNT
NNNNAQCELNRSASIM
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgctggttttgaatggaggaccttcaggagtgacacctatgaagccaggttcactgcag
cgcagtaggactgtttactgtatctctgtcacgttgattaggggtgagcagggccggctg
ggggaggcggggaaagacgatgctcagcctgcctcggcagcagataggattgcctcctgg
gagcagcagggagtgtgcttagtctctggaggtagctcggggcatagaagtccttcagga
gccccattcaagctctgtctaaacactgactttggaggcggaacgaggagtgactgtgtc
aatgctggtgaagaaaaaatgaaggaggacaggtttactgaacagagcaacactttgaaa
aacttagcagaggcaaccctgtcttctacactgcaggagtggcactggaacgactgccgt
tcagtcggtcaggatgatccaggagatcttttccttttggactctcccccattacccgag
cagcagtggcagaattctgcatgttcctcaagccctgggcaagttaagctcagaagagca
cttcagagccaccttcctcacgacaggagggctgtgagcatgtacagtttccccagcaaa
gtggaatctgcattaagagctacccagacgaagcaggggagacccaagagtatctgcgtg
gtggcgggtggcaggacagtggctggattcatctctgaaccaacctccccactctcccag
ccacacagcacagtgagtagcctgattgagctttttaggcagcaaaaagtaaaggaagtg
gatcttcatggtgggactactggtaacgccaagaagaacccagtagaggccactaaggtt
ctggtcatcccccaggaggtctccttgaggcagagacccaaggacaagcacagaacggtc
agcatgtccttcttggagatcaacaagctggtcccgcgagtagaacagctgggctctgag
gacgatcttgagtcggaaagctcctctgtcttcagccggaccagcatcggctccagcttc
ctgaggtctggattccgctggaagatgtttgggaaatctgctggggaagacgggaggtcg
ccccagcagggcacaaaagaggaaagcccaaaaaggaccctggcatctttcaggagaagt
ctgagcttcagaataaggagagggcttaataaagggggaagtaaggagcccaatggccgc
gtccgtgcaaaaagtgacggagatgccaatctctatccccagcgccctttctcttatttg
aacgggggactcctgccacctcttcctggcaagacggggtcccccacagaggagagtgtg
tttcactacatgaggtatcagagcaaagagaagctcagagtcctggaaatccctgttaac
cccaagctctccaaacccagtacagacgagcctagtgtatggaggttgctgactgagcgt
tttaggaaaaaggaacaatctccccccgacaaatctgaaataaacacagagcctgtaaaa
atccccctggccaggaaaaagagaccagagcttgttgacatagagacacttactggcaca
caacgcagtggaactcaagactcctttgtgaacagccaagaatggacgttaagccggtcg
gtaccagagctcaaagtgggtattgtgggcaacctttcaagcgggaaatcggcactggtc
cacaggtacctgactggcacatacgtacaggaggaatcccctgaaggtggcaggtttaag
aaggagattattgtggatggacagagttacctccttctgatcagagatgagggagggccc
ccggaactacagtttgctgcatgggttgatgctgtggtctttgtcttcagtctggaagat
gaaatcagtttccagacagtttataattacttcctgcggctctccagttaccgaaacaca
gctgaggtccccatggtccttgttggcacgcaagatgcaatcagtgctgcaaatcccaga
gttattgatgactcccgggcgaggaaattatccaatgatctgaagcgatgcacttactac
gagacctgcgccacgtacggtctcaatgtggagcgagtgttccaggacgttgcccagaag
gtggtagctttaaggaaaaagcagcagctttctatcggtccctgcaagtctctgccaaac
tctcccagccactcctccgtcccctcctcctcctccatcccctcggttcacattaaccag
gcgaccaatggcagtggcgggttcaacgactattcctcttctgtcccatcaactcccagc
atcagccagagagagatgcggatcgagaccattgcggcctccaacacacccactcctatc
cgcaagcagtccaagcgccgctccaatatcttcacatctcgaaaagccagcgagcaggca
aagagcatggactgcaaaacagacaacattggaagtggacgggccattcctataaaacag
ggtattctcctcaagaggagtggcaagtctctgaacaaggagtggaaaaagaagtatgtc
acgctttgcgacaacggtgtcctcacctaccaccccagcctacatgattacatgcagaac
gtccatggcaaagagattgacttgttgaggacaacggtgaaggtacctggcaaacgacca
cctagagctgtggccacaacggctcctactgccagtcccaaaaccaacgggctcatgaag
gacaggagcaacctgcagctaatgccagggaacagtggggccccccactccaccagcagc
agctccctgcagtcagagcgctcggtcagtggcatcaacctagtggcctacagcgccaaa
cccgacgggatgcaccagcgctccttctccgtgtccagtgctgaccagtggagtgaggcc
gtcatcacccccagcagcggcaccggcgccgctaatgggaccgcagactctctgtgctcc
agccccattgtgtcatgcacaaccagcccaaagttggatcccccaccatctccccacgcc
aaccgcaagaaacacaggcggaaaaagagcacaggtgcaacgaaaccagatgggcccacg
acgggcaatgaagagcaagaggagtcgtttgagttcaatattgtgtcgctgactggtcag
atgtggcattttgaggcatccacctatgatgagagggagtcttgggtccaggctatcgag
agccagatctttgccagtttacagtcatgtgaaagcagcaaaaacaagtcccggttgggc
agtcagagtgacgcacacaccatccagtcaatccgtaatgtcagagggaacagcttctgt
gtggactgtgaggggcctaacccagactgggccagtttgaacctcggcgccctgatctgt
atcgaatgttctggaatccaccggaaccttggcacacacctgtcacgtgtgcgctctcta
gacctggacgactggccagtggagctcagcatggtgatgacggctatcggcaacgccttg
gccaacagtgtctgggaggccttggttgagggctacaccaaacccacttcagacagctcc
agggaggaaaaggagtgctggatcagggcaaagtacgagcagaagttgtttgtggcgtcg
ctgccccagtccgatgtgcccctgggacagcagctgctccgggccgtggtggaggacgac
ctgaggctggtggtgctgctcctggcccacggctccaaggaggaggtgaacgagacctac
ggggatggggatggaaggactgctctgcacctgtccagcgccatggccaacgtggtcatc
acgcagcttctcgtctggtatggcgtggatgtgaagagcagggatgcccatggcctgacc
ccactatcctacgcacggagagctggcagccaggagtgcattgacatcttgatccagcac
ggctgccccaacgacaacttcattcccatccccacacccaacctatcccgccgcaacacc
aacaacaacaatgcccagtgtgagctgaaccgcagcgccagcatcatgtaa
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