Polyodon spathula (Mississippi paddlefish): 121314327
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Entry
121314327 CDS
T07273
Name
(RefSeq) YTH domain-containing family protein 3-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121314327
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121314327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
121314327
NCBI-ProteinID:
XP_041103388
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All DBs
Position
4:23229618..23247098
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AA seq
619 aa
AA seq
DB search
MSATSVDQQRPKGQGNKVQNGSMHQKDTVNDDDFEPYLSSQTNQSNSYPPMSDPYMPSYY
APSIGFPYSLSEAAWSTAGDPPMPYLTTYGQMSNGEHHFIPDGVFGQPGALGNTPPFLSQ
HGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSNYGYPPSSLGRAIADGQAGFGSDSQLSK
VPGLSSIEQGMAGLKLGADMAAVTKTVGSSLGGAVGMNSMVVNSMPPVSSSAPKPTSWAA
IARKPAKPQPKLKPKANMSMGGGTAVPPPPIKHNMNIGTWDDKGTTAKPPMAQQVLPPQP
LMHQQLLAQPQPLMHNQLPPQQQQLHLQSAQPPQQLPLGPMHQHHNPHHQHQHHQPQPGQ
PPQLQQPSLQQQPPQQQQQQQQPPPQNRWVAPRNRGASFNQNNGAENFGLGMGAPLSAPP
SSGEVHPVLEKLKTLNNYNTKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNK
RLDVAYRSLGNKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWI
FVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHY
EKRQEEEEAMRRERNRNKQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaccagtgtcgatcagcagagacctaaaggacaagggaataaagtgcaaaac
ggctcaatgcatcagaaggatacagtaaacgatgatgactttgagccttatttaagcagc
cagacaaatcagagcaacagctacccaccaatgtcggatccttacatgcctagttattat
gctccttcaattggatttccatactcccttagtgaagcagcctggtccacagcaggtgac
ccccctatgccctatttgaccacatatggacagatgagcaatggcgaacatcattttatc
ccggatggtgtttttggccagccaggggccttgggcaacacgcctcccttcctgagccag
catggattcaacttctttcctggcaatgcagacttttccacctgggggactagtggttct
cagggacaatcaacacagagctctgcctacagcagcaactatggctatccccccagctcc
ctgggcagagctatcgctgatgggcaggctggatttggcagtgacagtcagctcagcaag
gtacctggccttagtagcatcgagcaaggtatggctgggctgaagttgggtgcagacatg
gcggcagtgacaaaaacggtaggctcgtccctgggaggtgcagttggcatgaacagcatg
gtagtcaacagtatgccccctgtcagttcttccgcccccaagcccacctcgtgggctgct
atcgccaggaagcctgcaaaaccccagcctaaattaaaacccaaggcaaacatgagcatg
ggtggtgggactgctgtccccccgccaccgataaaacacaacatgaacattggcacctgg
gatgataaggggaccacagccaagcccccaatggcacagcaagttttgccaccccagccc
cttatgcatcaacagctcctggcacagccacagcccttgatgcataaccagttgcctcct
caacaacagcagctgcacttgcagtcagctcagccacctcaacagctgccactaggaccc
atgcatcagcaccataatccacaccatcagcaccaacaccatcagccccagccggggcag
cctccacagctacagcaaccttctctacaacagcaacctccccagcagcagcagcagcag
cagcagcctccacctcagaaccggtgggtggctcctcgcaaccggggcgccagctttaac
cagaataacggtgcagagaactttggtttggggatgggagcgccccttagcgctccccct
tcttctggggaggttcacccagtgctggagaaactgaagaccctcaacaactacaatacc
aaagacttcgactggaaccttaagaatggccgtgtgtttatcatcaagagctactctgag
gacgatatccaccgctccatcaagtattccatctggtgcagcactgagcatggtaacaag
cgtctggacgttgcctaccgctcgcttggcaacaagggccctctctacctgctcttcagt
gtcaacggcagcggacatttctgtggagtggcagagatgaagtctgtggtggactataat
gcctatgctggcgtgtggtctcaggacaaatggaagggcaagtttgaggtcaagtggatc
tttgtcaaggacgttcccaacaaccagctgcggcacatccgcttggaaaacaatgacaac
aaaccagtcaccaactccagggacactcaggaagtgcccctagaaaaggctaagcaagtg
cttaaaatcatagctactttcaagcataccacctcaatctttgatgactttgcacattac
gagaagcgtcaggaggaggaggaagccatgcgtagggagaggaatagaaacaaacagtaa
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