Polyodon spathula (Mississippi paddlefish): 121314365
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Entry
121314365 CDS
T07273
Name
(RefSeq) catenin delta-2-like isoform X1
KO
K23491
catenin delta-2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121314365
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
Adaptin_N
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
121314365
NCBI-ProteinID:
XP_041103466
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Position
4:26977165..27277781
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AA seq
1219 aa
AA seq
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MPVPDQPSSSEKTTMLSPVLNASNGDGSETETASAILASVKEQELQFERLTRELEAERQI
VASQLERCKLGSETGSMSSISSTEEPFRWNTQDGQKDIEDELTTGLELVDSCIRSLQESG
ILDPQDYSSSERPSLLSQSAMQLSSNPEGSFQYTASYHSNQTLALSDSSTSQFPTCSGQV
GGAVQSYNQVTSSRVAHLAASDPSQSQSRESFVPSHGSAFHLPDSQHTSTYYSSSTLPAQ
RVSSPLSMLQVGSNKLQRVGSTSENSGYCTTQRVSSPKQSPSRLAKSYSTSSPINLVVSS
SGLSSSPVRVASPPGVQAGLSCSSPIHQISSTVGNYATLSPTKRLLHTSDQYKHSHDLYT
TATLQRPGSLAGSRGSYSSQHSHLGSELRTLQSPEHHIDPIYEDRVYQKHPMRSLSQSQG
DPLQPGHTGTYRTSTAPSSPGVDSVPLQRTGSQQGPQNAMGTYQRASYAAGPASNYADPY
RTLQYCPSVDSPYSKSGPAIPPEGTLARSPSIDSIQKDPRYSREFLVWNQNQAEQRITKE
FGWRDPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKSEIRRQGGVQLLVDLLDHR
MSEVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTSDLEIRELVTGVLWNL
SSCDALKMPIIQDALAVLTNAVIIPHSGWGTAPHQEDRKLQLHSSQVLRNATGCLRNVSS
AGEEARRRMRECDGLTDALLYVIQSALGSSEIDSKTIENSVCILRNLSYRLAVETSQGQQ
MGTDELDGLLCGDANGKDTESSGCWGKKKKKKKSQDQWDGVLPESADPPKGIQMLWHPSI
VKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKWSVYVRAAVRKEKGLPILVELLRIDSD
RVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLPGGNSSSGNSTASKTMSDDTLTAIC
CALHEVITKNMENAKALRDAGGIEKLIGIARSKGDKHSAKVVKAASQALSSMWQYRDLRS
LYKKDGYSQYHFVGSSSTIERDRQRPYSSSRTPSISPVRTSPNNRSASAPASPREMISLK
ERKTDYESTGTSASYHGNKGEHTSRKDTMAVQVSSGTSTLFRNSYANPSEDIKHNQSLPQ
DNTRKDYETYPPFQNSTRNYEDSFFEDQVHHRPPPATDYNMHLGLKSTGNYVDFYSAARP
YSELNYETSHYPASPDSWV
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccagttccagaccagccttcttcctctgaaaagaccaccatgctaagccctgtactt
aatgcctccaatggggatggatcggagactgagacagcttccgcaatcctggcttctgtt
aaagaacaggagctgcaatttgagagactgactcgagaattagaggccgaacgacagatt
gttgccagccaattggagcgatgcaagcttggatctgagactggcagcatgagcagcatt
agttcaacagaagagccatttcgatggaacacccaagacggtcagaaggatattgaggat
gagctcactactggcctggagctagtggactcctgcataaggtcccttcaagagtcgggg
atactcgaccctcaggactattcttcaagtgaaagaccgagtctcctttcccagagtgca
atgcaactcagttccaatccagaagggtctttccagtacacagccagctaccatagtaac
cagacccttgccctgagcgattcctcgacatcgcagttccctacatgcagtggtcaagtt
ggaggtgcagttcagagctacaaccaggtcacatccagtcgtgtagcccatttagctgca
tctgatccttctcagtcccagtcgagagagtcctttgtgccaagccatgggagtgccttc
cacttgcctgactctcagcacacctccacttactactccagctccaccctgccagcacag
cgtgtgagctccccgctgtccatgctccaggtaggatcgaacaagcttcagcgtgtcggc
tcgacttcagagaactctggctactgcaccacccaacgggtctcttctcccaagcagtcc
cccagccgactggccaagtcctacagcaccagctctcccattaaccttgtggtgtcttca
tctgggctctcctcctctcccgtccgggtcgcctcaccaccaggtgtccaggccggcttg
tcatgttcctcgccaattcaccagatcagctccacagtgggcaattacgccacgctgtcc
ccaacgaagcggctgttgcacacctctgatcagtacaagcactcccatgacctgtacacc
acagccaccctgcagagacctggcagtctagcaggatctcgggggtcatatagcagccag
catagccacttaggctctgagcttcgcactctacagtcgccagagcatcatattgacccc
atctatgaggacagggtctaccagaagcaccctatgaggagtctcagtcaaagtcaaggg
gatccgctgcagcctgggcacactggcacttatcgcaccagtacagccccatcttcccct
ggtgttgactccgtacccttgcagcgtacaggcagccagcaaggtccccagaacgccatg
ggaacttatcagagagccagctatgcagcaggcccggcctccaattacgcagacccctac
cgcactcttcagtattgtccttccgtggattcaccgtacagcaaatctgggccagccatc
ccaccggaggggaccttggcaaggtcaccttccattgacagcattcaaaaggatcccagg
tacagccgtgaattccttgtctggaatcaaaatcaagccgagcaaagaatcacaaaggag
tttggatggcgagacccagagcttcctgaagttatccagatgctgcagcatcagtttccg
tctgtgcagtctaacgctgcagcctacttacagcatctctgcttcggagacaacaaaata
aaatcagagataaggagacaaggtggcgtccagctcctggtggatctcctcgatcatcga
atgtcagaggtgcacagaagtgcttgcggagcattgagaaatctagtgtacgggaaggca
aatgatgacaacaagattgccctgaaaaactgtggggggattcctgcactggtccggctg
ctgcgcaagacctcagatctggagataagagagttggtcacaggagtactctggaactta
tcctcatgtgatgccctgaagatgccaatcatccaggatgcccttgctgtgctgacaaac
gctgtgataatcccccactctggctggggcaccgctccacaccaggaggatcgcaaactg
cagctccattcatcacaggtgctgcgcaacgccacagggtgcctgaggaatgtcagttct
gctggagaagaggcacgcaggagaatgagggagtgtgatggactcactgatgcattgcta
tacgtgattcagtctgctcttgggagcagcgagattgatagcaagaccattgaaaactct
gtctgtatcttgaggaacctctcatatcggctagctgtggaaacatctcagggacagcag
atggggacggatgagcttgatggattgctttgtggggatgccaatggcaaggacacggag
agctcaggctgctggggaaagaagaagaagaaaaagaagtcccaagatcagtgggacggt
gttctcccagagtctgccgaccccccgaaagggatccagatgttgtggcacccttcaata
gtcaaaccctacctcacgcttttgtcagaatgctccaatcctgacacattggaaggggca
gcaggagctttacagaatctggcagcaggaagctggaagtggtctgtgtatgtcagagcc
gcggtccgcaaggagaaaggtctgcctatcctggtagagctgctacgaatagacagtgac
cgggtggtgtgtgcagttgctacagctctaagaaatatggccttagatgtgagaaataaa
gaacttataggcaagtacgctatgcgcgacctggtccatcgtctacctggaggaaacagc
agcagcggcaacagcacagccagcaagaccatgtcagacgacacattaactgccatctgc
tgtgctctgcacgaggtcataactaaaaacatggaaaacgccaaggccttacgagatgca
ggtggaattgagaagctaatcggcattgcaagaagcaaaggagacaagcactcagcaaag
gtagtgaaagcagcatctcaggccctcagcagcatgtggcaatacagggatctgcgtagc
ctctacaagaaggatggatattcacaatatcattttgttggctcttcttctacaatagag
agggataggcagagaccatactcctcctcccgtacaccttctatctccccagtcagaaca
tctcccaacaatcgttcagcaagtgccccagcctcccctcgagagatgatcagcctcaag
gaaaggaagacagactatgagtcgactggaacgagtgcaagttaccatggtaacaaagga
gagcacacttccaggaaagacaccatggcagttcaagtctcaagtggaacatcaacattg
ttccggaattcttatgctaacccgagtgaagatatcaaacacaaccagtctctccctcaa
gacaacaccaggaaagattatgagacttatccgccgtttcagaactccaccagaaactac
gaagactcattctttgaggatcaagtgcatcaccgccctcctcccgccactgactacaat
atgcatctgggactgaagtcaaccggcaactatgtggacttctattcagctgctcgtccc
tacagtgaactaaactatgaaacgagccactacccagcctctccagactcctgggtttag
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