Polyodon spathula (Mississippi paddlefish): 121314370
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Entry
121314370 CDS
T07273
Name
(RefSeq) zinc finger protein SNAI2-like
KO
K05706
snail 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121314370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314370
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
121314370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-Di19
zf-C2HC_2
Zn_SUZ12
Zf-C2H2_ZNF451_6th
Zf-C2H2_ZNF451_1st
zf-met
zf-C2HE
Zf-C2H2_ZNF451_C
zf-C2H2_15
DUF4764
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
121314370
NCBI-ProteinID:
XP_041103485
LinkDB
All DBs
Position
4:complement(27654323..27657102)
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AA seq
268 aa
AA seq
DB search
MPRSFLVKKHFNSAKKPNYSELDNHTVFISPCLYKGYHVPVIPQPDILSSVAYNPITVWT
TSSLPLSPLPDDLSPISGYPSSLGRVSPPPASDTSSKDHSGSESPISDEDERMHTKLSDP
HSVEVEKFQCSLCSKSYSTYSGLLKHKQLHCDAQTRKSFSCKYCEKEYVSLGALKMHIRT
HTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKK
YQCKNCSKTFSRMSLLHKHEESGCCVAH
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctcgtttcttgttaagaaacattttaactcagctaagaagccaaattacagt
gaactggacaaccacacagtcttcatttcaccgtgtttatacaagggttaccatgtgcct
gttatccctcaaccagatatcctgagttcagtagcatacaaccctatcacagtatggact
actagcagcctcccgttatccccattaccagacgacctgtcgccaatctctggatacccc
tcgtctcttggacgggtcagccctcctcccgcatctgacacttcttcaaaagatcacagc
ggctctgaaagccccataagcgacgaggatgagagaatgcacaccaaactttcagaccca
cattccgtggaagtggagaagttccaatgcagcttgtgcagcaagtcctactctacatac
tccggactgctcaaacacaagcagttacactgtgacgcacagacaaggaaatctttcagc
tgtaaatactgcgagaaggagtatgtgagcttgggagccctgaaaatgcacatccggacc
cacactttgccttgtgtttgcaaaatatgtggcaaagctttctccaggccttggttgctg
cagggacacatcagaacacatactggagagaagcctttctcttgcccgcactgcagcaga
gcgtttgcagacagatctaacctcagggctcatctacagacccattccgatgtgaaaaaa
tatcaatgcaagaactgctccaaaacattctccaggatgtcgcttctgcacaaacacgag
gaatctggttgctgtgtagcgcactga
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