Polyodon spathula (Mississippi paddlefish): 121314373
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Entry
121314373 CDS
T07273
Name
(RefSeq) suppression of tumorigenicity 18 protein-like isoform X1
KO
K24386
suppression of tumorigenicity 18 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314373
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121314373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2HC
MYT1
DUF3450
HAUS-augmin3
FapA
Macoilin
BRE1
DUF720
DUF1664
YabA
Cep57_CLD_2
DUF7310
KIF21A
Motif
Other DBs
NCBI-GeneID:
121314373
NCBI-ProteinID:
XP_041103488
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Position
4:complement(28200699..28312091)
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AA seq
1149 aa
AA seq
DB search
MNMGKGSLKRFRKESRIVQKRRGGSKVATKKNFTKTTIKGARPRVVDKPAVKSLSSLRRS
RNLEKPAEPEEEGEDEDHCSVSSGQENEFHPCILKQSQTYSCSEKLELSGTTCKSTCRQT
KMEAESEEKRLQTHKGSKVPVDCIAQALGTYGSMARKRSAQEVLCGAPVNKRKSLLMKPR
HYSPSNDCEEENEDLTEPEDKEEARSTDSPAGGNLGKLARVSLETDKLSRKNSYHNAVEK
TLLKQEPENSPEHAAFESTLNDSGIHSTEADSEGNVPHQAKEEKNAASEAEPYCSLVHSE
SHSEIVDSGWENLSKFVKVNGINGNHTTESLKKKSDAVKNDDDMDSGVCQDLDVQIKNLH
GETLGSRKDSSESEDKADVLDEDDGWSAGVSEHTLDFDRAKGNLSLLEQAIALQSEQRQV
LHNAYKEMDRFLLEQMSGERRHSRLVDIDGKHNYNNCKESPRSDKKETKCPTPGCDGTGH
VTGLYPHHRSLSGCPHKVRVPPEILAMHENVLKCPTPGCTGRGHVNSNRSTHRSLSGCPI
AAAGKNPKSQEDSPKSGQNSDWVSRLPGLPRQFEVPQYSYSFAQPVTALQANLAKNLDKY
SKVRFDYASFDAQVFGKRTVAPVALDKDAAHFSESSPQFSSSQTSSNRLPAPRAKSPCHP
STYSYSHTGDAHAAAAAAAILNLSPQYRGMPDSNSTKPQAPSRKDVFIEVDENGTLDLSM
KRNRVHEKVPPVLPLETVPSTPKSSPSKTGIILVTPAFYQALCEREGWDTPVNYSKAHKL
IDKEKEELDSVADNLEERKYPGDVTIPSPMSKPLSRDNKKELMSCPTPGCDGSGHVTGNY
ASHRSVSGCPLADKTLKSIMAANSQELKCPTPGCDGSGHVTGNYGSHRSLSGCPRAKKGG
LKLTPSKEDKEDKDLKCPVIGCDGLGHTSGKYTSHRSASGCPVAAKRQKESSNNGSPFSW
NVSKQELPHCPLPGCNGLGHANNVFVTHRSLSGCPLNAQTIKKCKHSGEEMMTIKLKASS
GIEDEEDMKHLDEEIKELNESNLKIEADMQKLQTQISSMECNLKSIEEENKMIEQHNDSL
LKELARLSQALINSLSDIQLPQMGPISEQNFEAYVNTLTDMYNNSEHDYSPECKALLESI
KQAVKGIHM
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggggaaaggaagcctgaaaaggttcagaaaggaatccaggatagtccagaaa
agaagaggtggcagcaaagttgcaactaagaagaatttcaccaagacaacaataaaggga
gcacgcccaagagttgtggacaagccagctgttaaatcattaagcagcttaagaagatca
agaaatctggagaaacctgcagagccagaagaggaaggggaagatgaggaccattgcagt
gtgtcctctgggcaagagaatgaatttcacccctgcatactgaagcagtcacagacttac
agttgtagtgagaagttagaactctctggaacaacttgtaaatcaacctgtaggcaaaca
aagatggaagcagaaagtgaagagaagaggcttcaaacacacaagggaagcaaggttcct
gtagactgtatagcacaggctctcggcacctatggctccatggcaagaaagagaagtgcc
caggaagtactgtgcggagccccagttaacaagaggaagtctcttctgatgaaaccacgg
cactacagtcccagcaatgactgtgaggaggagaatgaggacctcacagaaccagaggac
aaagaagaggcaaggagcactgactctccagcaggtggaaacttagggaaactagcccga
gtgagtttggagacagacaagctctcacgcaaaaacagctaccacaatgcagtggaaaag
acactactaaaacaagaacctgagaattcacctgagcatgctgcctttgaaagcaccctg
aatgacagtggcatccactccacagaagcagacagtgaaggtaatgtgccacaccaagca
aaagaggaaaagaatgctgcttcagaggcagagccttattgctctttggtgcacagtgaa
agccactctgaaattgtggacagtgggtgggaaaatttgtccaagtttgtgaaggtgaat
ggcataaacggtaatcacacaacagaatcactgaagaagaaaagtgatgcagtgaagaat
gatgatgacatggattcaggtgtttgccaagacctggatgtgcaaataaaaaatctgcat
ggtgagaccctgggctctaggaaagactcaagtgaaagtgaagacaaggctgatgttctt
gatgaagatgatggctggtcagcaggggtttcagagcacacccttgatttcgacagggct
aaagggaatctgagtctcctggaacaggccatagcccttcagtctgagcagcggcaggtc
cttcacaatgcttacaaggaaatggaccggttcttattggaacaaatgagtggggaacgg
agacacagcagactcgtagacattgatggcaaacacaactataacaactgcaaagaatct
ccacgatcagataagaaagaaacaaagtgccctacaccaggttgtgatggcactggtcat
gtgacaggactctacccacatcacagaagtctttctgggtgccctcataaggtccgagtg
ccaccagagatccttgccatgcatgagaatgtactaaagtgtccaacgccaggatgcaca
gggagggggcatgtcaacagtaaccgtagcacacacaggagtctttctggttgtcctatt
gctgctgctggaaaaaatccaaaatcccaggaagatagtccaaaaagtggacaaaattct
gactgggtctccagacttccaggcttgccaagacagttcgaggttcctcaatacagctac
agttttgcacagcctgtcactgctctccaagcaaacctggcaaagaatttggacaaatac
agcaaggtccgctttgattatgctagcttcgatgcacaggtctttggtaaacgcactgtt
gcccctgttgcactggacaaggatgctgcacacttttctgaatcatccccacagttttca
agctcacagacatccagtaacagactgccagctccccgggcgaagagcccctgccatccc
agcacctacagctacagccatactggagacgcccatgctgctgctgcggccgctgccatt
ctcaacctgtccccccaatacagagggatgcctgacagtaactctaccaagccgcaggct
ccctccagaaaggatgtattcatcgaggtggatgaaaatggcactctggacctgagcatg
aaaaggaaccgtgtacatgagaaggtccctccagttctacctttggaaactgtaccatct
acaccaaagtcttctccttcaaaaactggcatcatcctggtaacacctgccttctatcag
gctctttgtgaacgggaaggatgggacactcccgttaactacagcaaagcccacaaatta
atagacaaagagaaagaagagctggatagtgtagctgacaatctggaggaaagaaaatat
ccaggtgatgtaactattccgagcccaatgtccaaacctctttccagggacaataaaaag
gagctgatgagctgtccaactccaggatgtgatggaagtggacatgtgactggaaattat
gcttctcatcgcagtgtttctggctgtccattggctgacaagactctaaaatctatcatg
gccgccaattctcaggaactcaagtgtccaacacctggttgtgatggttcaggtcatgtg
actggaaactatggttcacacagaagcttatctggctgtccaagggccaagaaaggaggg
ctgaaactaacgcccagcaaggaagacaaggaagacaaagaccttaaatgtccagtaatt
ggttgtgatggcctgggtcacacatcaggcaaatatacatcccatcgcagtgcatcaggc
tgccctgtagctgccaagagacagaaggagagctccaataacgggtctccattctcctgg
aatgtcagcaaacaagaactgccacactgtcctttgccaggctgtaatggattaggtcat
gctaataatgtgtttgtcactcatagaagtttgtctggatgtcctttgaatgcccagaca
atcaagaaatgtaagcattcaggagaagagatgatgaccattaaacttaaagcaagcagc
ggtatagaagatgaagaagacatgaaacacctagatgaggagatcaaggaactgaatgaa
tcaaatcttaaaatagaggccgacatgcagaaactccagactcagatatcttcaatggaa
tgtaatttaaaatcaattgaagaagaaaacaagatgattgagcagcacaatgacagcctg
ctgaaggagttagctcgtctgagtcaggctcttatcaacagcctttctgatatacaactc
cctcaaatggggccaatcagcgagcagaattttgaagcctatgtgaacactctgacagac
atgtacaacaattcggagcacgattactcgcctgaatgtaaagctcttcttgaaagcatc
aaacaagctgtaaaaggcattcacatgtaa
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