Polyodon spathula (Mississippi paddlefish): 121314378
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Entry
121314378 CDS
T07273
Symbol
tcea1
Name
(RefSeq) transcription elongation factor A protein 1 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121314378 (tcea1)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121314378 (tcea1)
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Zn_ribbon_TFIIS
DBD_Tnp_Mut
DUF3656
Motif
Other DBs
NCBI-GeneID:
121314378
NCBI-ProteinID:
XP_041103499
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Position
4:complement(28801459..28814229)
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AA seq
315 aa
AA seq
DB search
MGKREEDEIIRIAKKMDKMAQKKNGSEALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQ
STDEEVTSLAKSLIKSWKKLLDEPGGAEKPPEEKKAPASLPVPAPASSSSLNSPEPREES
SSSSNSSSKDEAGDVPVNSLITTFPRAPSTSDSVRIKCREMLSSALQAGDDYIAIGADCD
ELGAQIEDCIFQEFKNIDMKYKNRVRSRIANLKDIKNPNLRRNVLCGNVAPDRMARMTAE
DMASDELKEMRKNLTKEAIRKHQLAKTGGTPSDMFCCGKCKKRNCTYTQVQTRSSDEPMT
TFVFCIECGNRWKFC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagggaggaagacgagatcataagaatcgctaaaaagatggacaaaatggct
cagaaaaaaaatgggtctgaagccttggatctgctgaaggagttgaagaacataccaatg
acgctggaattgttacagtctacaaggataggaatgtcagtgaatgccattcgcaagcaa
agcacagatgaggaggttacatcgctggcaaagtcactcatcaaatcttggaagaaacta
ttagatgaaccaggaggtgcagaaaagccaccagaagagaagaaggcgcctgcatcatta
ccagtccctgcacctgcttcatcatcttcactgaacagtcctgaaccaagagaagaaagc
agctcaagcagtaactctagcagtaaagacgaagctggtgatgttcctgtaaattctctg
attacaactttccctcgagccccaagcacatctgactctgtgaggattaagtgcagggaa
atgttatccagtgctctacaagcaggggatgactatattgctattggtgctgattgtgat
gaacttggagcccaaattgaggactgtatctttcaggaattcaaaaatattgacatgaag
tacaaaaacagggttcggagtaggatcgcaaatttgaaggatattaaaaacccaaatctt
agaaggaatgtcctttgtggaaatgttgctccagacagaatggccaggatgacggcagag
gatatggccagcgatgaacttaaggagatgagaaaaaacctgaccaaagaagcaatccga
aagcatcagctggcaaagacaggaggcaccccgtctgacatgttctgttgtgggaaatgc
aagaagaggaattgtacatatacacaggttcagacccgtagctctgatgaacctatgacc
acatttgttttctgtattgaatgtggaaataggtggaagttctgttga
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