Polyodon spathula (Mississippi paddlefish): 121314398
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Entry
121314398 CDS
T07273
Name
(RefSeq) nucleolar transcription factor 1-A-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314398
03021 Transcription machinery [BR:
pspa03021
]
121314398
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
121314398
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
121314398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
121314398
NCBI-ProteinID:
XP_041103549
LinkDB
All DBs
Position
4:30406944..30428023
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AA seq
716 aa
AA seq
DB search
MNGNGTLSSVTQTVCIKCEPVMEEWSKEDCLILLDRIRTLLPDVDAMKYKTTESHFDWEK
VCFGPFTGDMCKQKWQKVSTEVRKYRTMTELLIDAMEYVKNPYKGKKLKTHPDFPKKPLT
PYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKLKYIQDFQREKESFEKNMA
RFKENYPDLIEERKKSDVPEKPKTPQQLWYNHEKKTYLKLHPDVSPKELKDALRRQWSQL
SDKKRLKWISKALELQKDFETTMREYHEAHPETNQDEHVKSVLTKAERQLKDKFDGRPTK
PPPNGYSLYCAKLMITMKDVPSTERMVLCSKQWKIMTQKEKDMFQKRCELKKKQYEIDLQ
RFLESLPEEERDRVLTEEKLGGSRMALGNSASSLRVKSTPVKMKLSDVDQTHADQEQSLL
KEKRDRKKKVRLPETPKTANEMWQQSVIGDYLAKYRNNRKKAQSSMESAWKAMEKKEKIP
WIKKAAEDQMRYERELIEMRTPPSAQAQRKPKFDGEPKKPPMSGYQMFSQELLTNGELNH
FSLKERMVEIGKRWHKLNQSQKNKYKKLVEEQQTEYKAELEAWVKSLSPQERANYKEFST
VKRRNSSKAGGPAAKVRVTGKGKAADVCARAPGLGAGEGKKAVAYRAQNTSDSEEEEKSD
SSNSEEDSSGSSDSEDEDENGDEEEDDDDDDEDEEDDQSEASSSSSSEDSSDSDSD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaacggcactctctccagcgtcacccagactgtatgcatcaagtgtgagcca
gttatggaagagtggagtaaggaggactgtctgatcctgctagaccgaatccgcaccctg
ctgcctgatgtggatgccatgaagtacaagaccactgagtcgcactttgactgggagaag
gtgtgcttcgggcccttcaccggagacatgtgcaagcagaaatggcagaaggtctccact
gaggtgaggaagtatcgaaccatgacagaactccttatcgacgccatggagtatgttaag
aacccctataagggcaagaagctcaagacccatccagactttcctaagaagcctctgacg
ccatactttcggtttttcatggagaaacgagccaagtatgcaaagatccacccagagatg
agtaacctggacctcaccaagatcctgtccaagaagtacaaggagctgcccgagaagaag
aagttgaagtacattcaggattttcagagggagaaagagtcgtttgaaaagaacatggcc
agattcaaggagaattacccagatctgattgaggagaggaagaaatctgatgtcccggaa
aagcccaagacaccacagcagctctggtacaaccatgaaaagaagacctacctgaagctg
caccctgatgtaagcccgaaggaactgaaggatgctctgaggcggcagtggtctcagctg
tccgataagaaacgtctcaagtggatcagcaaggcactggagctgcagaaggactttgag
acgactatgagggagtaccacgaggctcaccccgagaccaaccaggacgagcacgtcaag
tctgtcctgaccaaggcagagcggcagctcaaagacaagttcgacggccggccaactaaa
cctcctccgaatgggtactccttgtactgcgccaagctcatgatcaccatgaaagatgtc
cccagcacggagcgcatggtgctctgcagcaagcagtggaagatcatgactcagaaagag
aaggacatgttccagaagcggtgtgagctgaaaaagaaacagtatgaaatcgacctgcag
agattcctggagagcctgccagaggaggagagggaccgggtgctgacggaggaaaagctg
gggggctccagaatggcactgggaaactcagccagctccctgcgagtcaaatccacaccc
gtcaagatgaagttgagcgatgtggaccagacgcatgcagaccaggagcagagcctcctg
aaggagaagcgtgaccgaaagaagaaggtgcgcctgcctgagacccccaagaccgccaat
gagatgtggcagcagagtgtcatcggggactacctggccaagtaccggaacaatcggaag
aaggctcagtcctccatggagtcagcctggaaagctatggagaagaaggagaaaattccc
tggattaaaaaggcagctgaggaccagatgagatacgagagagagctgatagagatgagg
acccctccgtcagcccaagcccaaaggaaacccaaatttgacggggagccaaagaaaccc
cccatgagcggttatcagatgttctctcaggagctgctgactaacggggagctgaaccac
ttcagcctaaaggagcgcatggtggagatcggcaagcgctggcacaagctcaaccagagc
cagaagaacaagtacaagaagctggtggaagagcagcagacagagtacaaggctgagctc
gaggcctgggtcaagtctctttcacctcaagaacgggctaattacaaggaattctctaca
gtgaagcgacggaactcctctaaggcaggtgggccagctgccaaagtgcgggtgacaggg
aagggaaaggcagcagatgtctgtgccagagctccaggactgggggccggggagggcaag
aaagcagtggcatacagagcacagaatacttcagactctgaggaagaagagaaatccgac
tcttctaattcagaggaggactcatccggcagctcagacagcgaggatgaagacgagaat
ggtgatgaggaggaggatgatgatgatgacgacgaggatgaagaagatgaccaatcagaa
gccagcagtagctcatcttcagaggacagctcagactcagattcagattaa
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integrated database retrieval system
