Polyodon spathula (Mississippi paddlefish): 121314430
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Entry
121314430 CDS
T07273
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121314430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121314430
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121314430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
PKD_4
Fibulin_C
DUF6641
Motif
Other DBs
NCBI-GeneID:
121314430
NCBI-ProteinID:
XP_041103635
LinkDB
All DBs
Position
4:complement(31923970..31940690)
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AA seq
1157 aa
AA seq
DB search
MAGISIAGTGLLLLFMLMVLASHVKAEWVVPPIKIRENEDYSSKNPIAKIRSDVRDVVRY
TLVGEGADQRPYRLFVINPDNGDISITSVVDREEKSSYILKGRAYNSAGQQVEGDIDLKI
KIEDVNDNNPRFTQKTFSGSVYELSKIDTFVTQINATDADEENSINSLIAYEILEQSPGN
MFYVERNTGRILVADSNLDRETHSKYSLMVQAKDLNGESGGLASTAQLEIAIADVNDNVP
TLEKGSYEGTIVENTKGMEVMRMKALDADEEFSDNWLAKFEIVSGNEGGYFRIETDPKTN
EGVLILQKEVDYEELQNLALGVVVRNKAPFYSSVVDTSTSVNIGGGGGGGGGGGGGGGGG
GGGGGGGGGSSGFGGGGSSGGGGGGSFAAGGGSSSSYTLKPVPVKLNVQNVLEGPKFSPK
VKAIPISEEVDQVDLSKVIAQYPAIDADTGKIAENVKYVKKYDPDNWLIIDQKTGDIKLA
KVPDRESKFLVNGTYTAEILAITDDLPAKTSTGTVAIQVEDFNDHCPTLTSTFTDMCSSD
KSVLVTAVDIDADPNSVPFKYQIVDDPEGTAQNWKIEHLNGTSMLLRPTKTIWPGQYGVT
LLIYDQQGKSCSDKQVLNIAVCTCTNIGSCAAESDRVQSIVTRLGPAAIGLMILGLLLLL
LVPLLLLFCTCGAGAGSNFIPVTDGSAGQLIPYDTEKMGEDKAVPALVPSMDSLKIGGGV
SGTRTLGFGERAMYSNNSKCMGSPGVFAMATRPVAAEYDLVGPGYGCGYEAEWCHSNGGS
GDDFEGVALPEAYLEQYYMEKAKYVSDEGHPQKDAALVYNYEGQESPVGSLGSCSFIEGD
LDQSFLNELGPKFKTLAEICMGSEMTSGVSVEQPNVAVQHTAVSVNPVISNNRVMTNKTV
EMTTPVPAPQVQKNVVVTENLSPPQPTVYLQKNLVVSDPAHVQQPAYIQQPAYIQQPVYY
ATNPIIQTTRYIVGPQVQRNVMIERSSVPGLQGHILMSDIPNTQNVMVTQKRLVHGSGIQ
DGMVMGLDQGALRVSEMPSSQNVVLLENRGFDQGSMHLSNPVSQNVVLKEKRVVSGHNVQ
GGTMGYELGSLQRNVMPGSQNVTVTEKTVVSDSSVQGGKMGFGQGSLHMSKMPGSQNITV
TEKRVVSGSSVQGGLIG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatttccattgcagggactggtttgctgttactgtttatgttaatggttttg
gcaagtcatgtgaaagcagagtgggttgttccaccgattaaaattagagaaaatgaagat
tattccagcaaaaacccaattgccaaaattcgctctgatgtaagagatgtagttagatac
acacttgttggtgaaggagctgatcagagaccttatcgcctatttgttattaatccagac
aatggtgacattagcataacatcagttgttgacagagaagaaaagtctagctacatactg
aaaggacgagcttataactctgcaggacaacaagtggaaggtgatattgacctgaagatt
aaaattgaggatgttaatgataacaaccccagattcacccagaaaacattttccgggagc
gtttatgaactgagcaagatagatacttttgtaacgcaaataaatgcaactgatgcagat
gaggagaactcaataaattcactcattgcttacgaaatacttgaacagagccctggaaat
atgttttatgttgaaaggaacactggcagaatactggtagcagattctaaccttgataga
gagacacattcaaagtattctcttatggtacaagccaaagatttgaatggagaatcgggt
ggtcttgctagcacagcacaacttgaaattgcaattgcagatgttaatgataatgttcca
acactggagaaagggtcttatgaaggtactattgttgaaaatacaaaaggcatggaagta
atgagaatgaaagcccttgatgcagatgaagaattttcagacaactggcttgccaaattt
gaaattgtgtctggcaatgaaggaggttacttcaggattgagactgatcctaagactaat
gaaggggttttgattctacaaaaggaagttgactatgaagaactacagaaccttgccctt
ggagttgttgtcagaaacaaagcacctttctatagttctgttgtagacaccagcactagt
gtcaacataggtggaggaggaggtggaggaggtggaggaggtggaggaggaggtggaggt
ggtggaggaggaggaggaggaggaggaagtagtggttttggaggaggcggcagtagtggt
ggtggaggaggaggtagttttgcagcaggtggaggatcctcatcatcttacactctaaaa
ccagttccagttaaactcaatgtgcaaaatgtgctggaaggtcctaagttttctccaaag
gtaaaggcaattcccatttctgaggaggtggatcaagtggatctttcaaaagtaattgca
cagtatccagccattgatgcagacactggaaaaattgctgaaaacgtcaagtatgtaaag
aaatacgatcctgataattggctgataattgatcagaagactggagatattaaacttgca
aaagtaccagaccgtgaatcaaaatttttggttaatggcacatacactgcagaaatattg
gccattacagatgatttacctgcaaaaacttctactgggactgttgctatccaggtagaa
gacttcaatgatcactgtccaactcttacaagtacctttacagacatgtgttccagtgac
aaatcagtgctagtaacagctgtagatattgacgcggatcccaatagtgttccttttaaa
taccagattgttgatgaccctgagggtacagcgcagaactggaaaattgaacatctcaat
ggaactagcatgctactgagaccaacaaaaaccatttggcctggtcaatatggtgtaacc
cttttaatatatgatcagcaggggaaatcctgtagtgacaagcaggttctaaatattgct
gtctgcacttgtacaaatattggatcatgtgctgcagagtctgacagagttcaatcaatt
gtaactagacttggacctgcagctatcggccttatgattctaggactcttactgctgcta
cttgtgcctcttctgctgctattttgtacatgtggggctggagcggggagcaattttatc
ccagttactgatggctcagcaggacaattgattccatatgacacagaaaaaatgggtgaa
gataaggcagttccagctcttgttccatcaatggatagtttaaaaattggtggcggggtc
agtggcaccaggacattaggatttggagaacgtgctatgtacagtaacaacagcaaatgt
atgggttctcctggggtatttgcaatggcaacaagaccagtggcagctgaatatgacttg
gtgggaccagggtatggatgtggttatgaagcagaatggtgtcactccaatggaggcagt
ggagatgactttgagggtgtagctctgcctgaggcttacttggaacagtactatatggag
aaggctaaatatgtttcagatgaaggacatccacaaaaagatgctgccttggtgtataat
tatgaaggtcaagagtcacctgtgggttcgttagggtcttgtagctttattgaaggagat
ctggaccaaagcttcctaaatgaactaggaccaaagtttaagactcttgctgaaatatgc
atgggctcagagatgacttcaggagtttctgttgagcagcctaatgttgctgttcagcac
actgctgtgtccgttaacccagtcatcagcaataatcgtgtgatgaccaacaaaactgtt
gagatgaccaccccagttccagcgccccaggtccaaaagaatgtggttgttacagaaaac
ttgtctcctcctcagccaaccgtgtatctccagaaaaatctagttgtttctgaccctgcc
catgttcaacagcctgcctacattcaacagcctgcctacattcaacagcctgtatactat
gccactaacccaatcattcagaccactcgatacattgttgggccacaggtccaaagaaat
gtcatgatagaaaggtcttctgtccctggcctgcaaggtcacattctaatgagtgacatt
ccaaacactcagaatgtgatggtgacccagaagagattggtgcatggctcgggcattcag
gatggcatggtgatggggttagatcagggtgctctgcgcgtgagtgaaatgccaagctca
cagaatgtggtactactagaaaatagaggttttgatcagggaagcatgcacttgagtaac
cctgtctctcagaatgtggtgttaaaagagaagagagtggtgtctggacataatgtgcag
ggtggtacgatggggtacgaactgggcagcttgcagagaaatgtaatgcctggttcacag
aatgtaacagtaacagagaagacagtggtatctgattccagtgtgcagggtggaaagatg
gggtttggtcagggtagtctgcacatgagtaaaatgccaggctcacaaaatataacggta
acagagaagagagtggtatctggaagtagtgtgcagggtggtttaataggatga
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