Polyodon spathula (Mississippi paddlefish): 121314438
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Entry
121314438 CDS
T07273
Name
(RefSeq) protein SSXT-like isoform X1
KO
K15623
protein SSXT
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121314438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121314438
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121314438
GBAF(ncBAF) complex
121314438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
121314438
NCBI-ProteinID:
XP_041103643
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All DBs
Position
4:32959253..32987508
Genome browser
AA seq
394 aa
AA seq
DB search
MSVAFAAHRQRGKGDITPAAIQKLLDENNHLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKSDSPTTEIKHEPPSQNMAMGPGGMNQSGPPQPPHGHSMPPEG
MVGGGPPASHMQNQMNGQMPGPNHMPMQGPGPNQPNMPNSSMNMPPNSHGSMGGYNHSVP
SSQSMPVQNQINMNPGQPMGNYGPRPNVNMQPNQAGPMMHQQPPSQQYSIPQGGGQHYQG
QQNPMAMMAQVSQGNHVMGQRPMPPYRPPQQGPPQQYAGQEDYYGEQYSHGSQGSAEGNS
QYTQQQEAYQQGPPQQQGYPPQQQQQQQQQYPGQQAYPGQQQGYGPSQGTPGQYPSYSQG
QGQQYGGYRPPQPTQTQQQRPYGYDQGQYGNYQQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggcatttgcagctcacaggcagcggggaaagggcgacatcacacccgcagct
attcagaagttgcttgatgaaaacaatcatcttatccaatgtataatggacttccagagc
aaaggaaaaactgcggagtgctcacagtatcagcagatgttgcacagaaatttagtttac
ctggctacaattgcagactccaatcagaatatgcagtctctcctgcctgctaaatctgac
tcacccaccacagagataaagcatgaacctccttcacagaacatggctatgggtccaggg
ggcatgaatcaaagcggcccaccccagcccccgcacggtcacagcatgcccccagaaggc
atggtcggtggaggacctcctgcctctcacatgcagaaccagatgaacgggcagatgcct
ggacccaatcacatgcccatgcaaggacctggaccaaaccagcctaacatgccaaacagc
tccatgaacatgccacctaacagccatggatcaatgggaggctacaaccattccgtccca
tcctcacagagcatgcctgtacagaaccagattaatatgaatccaggacagcctatgggt
aactacggccctcgaccaaacgtgaacatgcagccaaaccaagcaggtcctatgatgcac
caacagccaccttctcaacaatacagcattcctcagggaggagggcagcattaccagggc
cagcagaaccctatggcaatgatggcccaggtcagccaaggcaaccatgtaatgggacag
agacctatgcctccgtacagaccgccacagcaaggtcctcctcagcagtacgctggccag
gaggattattatggggagcagtacagtcatggctcgcaaggctctgcagaaggtaattca
cagtatacccaacagcaagaagcctatcagcaaggacccccacagcagcaaggctatcca
cctcagcagcagcagcagcagcagcagcagtatccaggccagcaagcttacccagggcag
cagcaaggctatggtccatcccagggcaccccaggacagtatcccagctactcccaaggg
cagggccagcaatatgggggttacagacctcctcagcccacccagacacagcagcagagg
ccttatggatatgatcaggggcaatatgggaattaccagcagtga
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integrated database retrieval system
