Polyodon spathula (Mississippi paddlefish): 121314447
Help
Entry
121314447 CDS
T07273
Name
(RefSeq) GATA-binding factor 6-B-like
KO
K17897
GATA-binding protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314447
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121314447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
121314447
NCBI-ProteinID:
XP_041103666
LinkDB
All DBs
Position
4:complement(33893344..33904470)
Genome browser
AA seq
501 aa
AA seq
DB search
MDLSEPNWSMVKRLSSRSPGSSRAEQNYFSSDRRDRPASASEELRSPSATNLDTVENQPT
EGRSLHSYINSGHRISSPSSEDITLFTDLDQGNKLIISSGKFKGSLVVDTSEMYQTLAMA
AAQGPAGYDTSASSFMHSTTTSPVYVPTTRVGPMISGIPYLQGSAASQPSHAVSNHSVWS
QPASESPSYSTGSPHASNRFHYSPSPPVNNGASRDGNYSSTLNVNGRDQYSPLARPLNGS
YPSPYSPYVGSQLTTAWPTGPFDNTMLHTLQNRGAPIPIRAPNGDILDDLGESRECVNCG
SISTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRMSSSRRIGLSCANCHTSTTTL
WRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKNLNKSKAPSGSSNPVPMT
PTSSSSSNSEDCTKTGSPSAQVPVSGINSSAMSGQGDSTNAGSTALNYSGQEGLYAGVNL
TSNAEVAASVRGETWCALALA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggacctcagtgaacccaactggtccatggttaagcgactatcatctcgcagcccaggg
tcgtcgcgggctgaacaaaattactttagcagtgacagaagagacagacctgcttctgca
tcagaagagctgaggtcaccatcagctaccaatcttgacacagtagaaaaccagccaaca
gagggcaggtcactacactcctacattaattctggacatcgcatcagctcaccgagttcg
gaggacataacactcttcacggatttagaccagggcaacaagcttattatttccagtggg
aaattcaaagggagcttagtggttgacaccagtgaaatgtaccaaaccttagccatggct
gcggcccaggggccagcaggatacgacacgtcagccagtagctttatgcactccacaaca
acttctccagtttacgtaccgacaaccagggttggacccatgatctctggcatcccgtac
ctgcaagggagcgcggcttcacagccaagccacgcggtcagcaaccactctgtgtggtcc
caacctgcctcggagagcccatcctacagcacaggtagcccgcacgcctctaaccgtttt
cactactctccaagtccgccagtgaataacggagcatcaagggatggcaactacagcagc
actctgaatgtcaacggcagagaccagtacagtcctctggccagaccgctaaatggatct
tacccaagcccatattcaccttacgtgggatcgcaacttacaacagcctggccaacagga
ccctttgacaacactatgcttcatactttacaaaacagaggggcacccatacctattcga
gcaccaaatggagatatactggatgatttaggtgagagcagagaatgtgttaactgtggc
tccatctctacgcccctgtggagacgagatggcacggggcactatctctgtaacgcatgt
ggtctgtacagcaagatgaacgggctcagcagaccacttattaaaccacaaaaacgaatg
tcttcgtcgaggcggatcggcctgtcctgtgcgaactgtcacaccagtaccaccacactg
tggcgcaggaatgcagaaggggaaccagtgtgtaatgcttgtggactctacaccaaattg
cacggggtacctaggccgcttgcaatgaagaaagaaggaatccagacgaggaaaagaaaa
cccaagaaccttaataaatccaaggccccctctggcagcagcaatcctgttcccatgact
ccaacttcctcgtcttcatcgaactctgaggactgcacgaagactggctctccatctgcg
caagtgccagtgtctgggatcaattcctcagcaatgtcgggccaaggagatagcaccaac
gctggaagcactgcactgaactattcaggtcaagagggcctctatgcgggagtcaatctg
acctccaatgctgaagtcgccgcctcggtccgaggagagacgtggtgtgctctggcactg
gcctga
DBGET
integrated database retrieval system
