Polyodon spathula (Mississippi paddlefish): 121314455
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Entry
121314455 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14-like isoform X1
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121314455
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121314455
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121314455
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121314455
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121314455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Cauli_DNA-bind
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
121314455
NCBI-ProteinID:
XP_041103683
LinkDB
All DBs
Position
4:34262095..34280311
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AA seq
494 aa
AA seq
DB search
MPMFTVNVKWGKEKFDAVELNTEEAPMVFKAQLFALTGVQPERQKVMVKGETLKDEEWGK
IKIKNGMTLLMMGSAEALPEEPVVRPVFVEDMTEEQLASALEMPSGLTNLGNTCYMNATV
QCLRSVPELKEALKRYSGALRGSGANASSQYITAALRDLYDSMDKTSSSIPPIILLQFLH
MAFPQFAEKGEQGQYLQQDANECWVQMMRVLQQKLEPLEGEAPMETDSGTAAESGAAAAP
TKKYFIDQFFGVEFETTMKCAEAQDEEPTKGKENQLQLSCFINQEVKYLATGLKLRLQEE
ITKLSPSLQRNALYIKSSRISRLPAYLTVQMVRFFYKEKESVNAKVLKDVKFPLMLDVFE
LCTTELQEKMVSIRSRFKEVEDDKLNTQQQKVDTKNGTPKEVKYEPFSFPNDTGSNNSGY
YDLQAVLTHQGRSSSSGHYVSWVKRKADEWIKFDDDKVSVVSPEDILKLSGGGDWHIAYV
LLYGPRRLEILEKQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgtttacagtaaatgtgaaatgggggaaagagaagtttgatgcagtggagctg
aacacggaggaagccccaatggttttcaaagcacagctgtttgcactgacaggagttcag
ccagagagacagaaagtcatggtgaaaggagaaacgctgaaggatgaagagtggggaaaa
atcaaaataaaaaatggaatgactttgttaatgatgggctctgcagaggcgctgcctgag
gaacctgtagttcgtccagtctttgttgaagatatgacagaagaacaactagcatcagca
ctggagatgcccagtggactgacaaacctgggcaatacttgctacatgaacgctactgtt
cagtgcctgcgttctgtgccagaactcaaagaagccctaaagaggtattccggtgccttg
agaggttcaggggcaaatgcttcttctcagtatattacagcagctcttcgtgacttgtat
gactccatggataaaacatcctctagtataccgcctatcatcctcctgcagttcctgcac
atggccttccctcaatttgcagagaaaggggaacaaggacagtatcttcagcaggatgcc
aatgagtgctgggttcagatgatgagagtattgcaacaaaagctggaaccattggaggga
gaggctcctatggagactgattctgggacagcagcagaaagtggtgcagcagctgctcca
accaaaaagtactttatagaccagttctttggtgtggagtttgaaaccactatgaagtgt
gcagaagctcaggacgaagagccaacaaaagggaaggagaaccagcttcagctcagctgc
ttcattaaccaggaggtcaaatacctcgccacaggactcaaattgcgtctacaagaagaa
atcaccaaactgtctccctccttgcaacgaaatgctttgtacataaaatcttccagaatc
agccgtctacccgcctacttgactgttcagatggttcgattcttttacaaagagaaggag
tctgtgaatgccaaagttctcaaggatgtgaaattccccttaatgctcgacgttttcgag
ctctgtactacagagctgcaggagaaaatggtgtccatccgatcaaggttcaaggaggta
gaagacgacaaacttaacacgcagcaacaaaaggtggatacgaaaaatggaactccaaaa
gaagtgaaatatgagccattttcctttcccaatgatactggctctaacaacagcggatac
tatgacctacaggccgtcctaacacatcaaggacgatctagttcatcgggtcattatgtg
tcctgggttaagagaaaagcagatgagtggatcaagtttgacgatgataaagtcagtgtt
gtgtcccctgaagacatcttgaagttgtcaggtggtggagactggcacatagcatacgtc
ctgttgtatggacctcgtcggttagaaatacttgaaaagcaataa
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