Polyodon spathula (Mississippi paddlefish): 121314476
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Entry
121314476 CDS
T07273
Name
(RefSeq) ras-related protein Rab-12 isoform X1
KO
K07907
Ras-related protein Rab-12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314476
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121314476
04031 GTP-binding proteins [BR:
pspa04031
]
121314476
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
121314476
Endosome - Lysosome transport
Rab GTPases and associated proteins
121314476
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121314476
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab12/18
121314476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
SRPRB
AAA_14
RsgA_GTPase
AAA_16
Septin
AAA_24
NACHT
AAA_22
PduV-EutP
nSTAND3
AAA_7
FeoB_N
Motif
Other DBs
NCBI-GeneID:
121314476
NCBI-ProteinID:
XP_041103726
LinkDB
All DBs
Position
4:complement(35376272..35391091)
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AA seq
254 aa
AA seq
DB search
MMDSRYSEIQRRGGGGGGGNSAQSWGSLSGSPALTGGQSRRRKLQPRPADYKLQVIIIGS
RGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELREKKIRLQIWDTAGQERFNSITSA
YYRGAKGIVVVYDITKQETFDDLPKWMKMIDKYASEDAELLLVGNKLDCEADRIITRQQG
ERFAQRISCMRFCEASAKDNYNVDEIFLKLVDDILNKLPLELPRKELSNSILSLQPEPEI
PPELPPARPNLRCC
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgatggattcgaggtacagtgagatacagcggagaggcggaggcggtggtggtgggaat
agcgcacaaagctggggctcgttgagcggttccccggctctgaccggcgggcagtctcgc
cgaaggaagttgcagccacggccggccgattacaaattgcaggtcattatcatcggctcc
cgcggagtcggcaaaaccagcctgatggagaggttcacggatgatactttctgcgaagcg
tgcaagtccactgttggggttgattttaaaatcaaaactgtagagctaagagaaaagaaa
atcagattacagatctgggatacagcagggcaggaaagattcaacagcattacttctgct
tactacagaggagccaaggggattgtagtagtgtacgacattacaaagcaggagacattt
gacgacttgccaaagtggatgaaaatgattgacaagtatgcttcagaggatgcggaactt
ttactagttggaaacaagttagactgtgaagctgacagaataatcacccgacagcaaggc
gaaaggtttgcccagaggatatcctgtatgcgattctgtgaagcgagcgcgaaggataat
tataatgttgatgagatatttttaaaactcgttgatgacattctgaacaagttgcctcta
gaacttcccaggaaggagctgtccaacagcatcctgtctcttcagccagagcccgagatc
ccccctgagctgcctcctgcccggcccaacctgcgctgctgctga
DBGET
integrated database retrieval system
