Polyodon spathula (Mississippi paddlefish): 121314478
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Entry
121314478 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase mu-like isoform X1
KO
K05693
receptor-type tyrosine-protein phosphatase mu [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121314478
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121314478
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121314478
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121314478
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121314478
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121314478
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Type II RPTP family
121314478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
ig
PTP-SAK
DSPc
Tc-R-P
Ig_3
I-set
Y_phosphatase3
PTPlike_phytase
Ig_2
V-set
TM_ErbB1
Pur_ac_phosph_N
PTP_tm
DUF4954
Motif
Other DBs
NCBI-GeneID:
121314478
NCBI-ProteinID:
XP_041103730
LinkDB
All DBs
Position
4:complement(35409405..35684846)
Genome browser
AA seq
1502 aa
AA seq
DB search
MERVITYLVAAVSLFVSIRGQVYTGDCSFDESYTTCGYSQAKDDDLDWEQVNTKVKPSSD
PWMPSGPTFMMVNTSGKFSGQKAQLMMPQLKENDTHCIIFKYYVSGRDGVNPGLLNVYVK
ANNGPLGSPIWNMSGVATRTWNQVELAISTFWPSFYQVVFEVVTSGQHGYLAIDDVVLQG
HQCINTPHFLHIKGMEVNAGQTATFQCSANGQHEDSYRFWLQGMAGQEAPMKDIKPLNTR
RFLATFNVVNTTKQDTGSYRCLVQSENGVGLSNYGELVVRQPPVPIAPPQLTAVGATYLW
IQLNANSINGDGPITQREVAYRTLSGSLIDNQPVDKSTHKIGHLDPDTEYEISVLLTRPL
EGGTGAPGPALRARTKCADPMHGPRKLEVVDIKSKQITVRWEPFGYNVTRCNSYNLTVHY
RYQVGTKEEVREEVCYETNSHFPQHTIRELSPYTNVSVKLVLMNPEGRKESQELGVLTDE
DVPGEVPLESIQGSTFEEKIYLQWREPVQTYGIITLYEISYKAVSSFDPEFDLSNQSGKV
FKHGNETHHLFVGLYPGSTYSFTVRASTVKGYGQPVITQFTTKISAPCMPAYDQETPLNQ
TDITVTVLLKPAQSRGAPVSVYQVVVEEERPRRAKKAAEILKCYPVPVHFQNASILNSQY
YFSAEFPASVIQSSLPFTVGNNKTYNGYWNVPLLPHKSYSIYYQAVSTANGETKIDCVRV
ATKAAIIVTQLTTPYIRIAPASGDNQLTGTATLKPDAVEPEKQTDHTVKIAGVIAGILLF
VIIFLGVVLVMKKRRNYHSYTYYLKLAKKRKETQSSTRQEMTVMVNSMDKSYTEQGTNCD
EAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTTVPASYYPDPFVPTAILVPINDENHTLVS
DTSSLVQSHSYKKREPVDVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEG
QSAPWESAKKDENRMKNRYGNIIAYDHSRVRLLPLEGEQNSDYINANYIDGYHRPNHYIS
TQGPMQETVYDFWRMVWQENTASIVMVTNLVEVGRVKCCKYWPDDTEIYRDMKVTLIETE
LLSEYVIRTFAVEKRGAHEIREIRGFHFTGWPDHGVPYHATGLLGFVRRIKSKSPANAGP
MVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDA
ILEACLCGDTTIPASQLRSVYYEMNRLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALL
PRNHEKNRCMDVLPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKD
FWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRI
YNAARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVEKWQEEYDGGEGRTVVHCL
NGGGRSGTFCAVSIVCEMLQHQRVVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLN
LG
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggagagagttataacttatttagttgctgcggtcagtctttttgtctcaattagagga
caagtatatacaggtgactgcagctttgatgaatcatacacgacatgtggatatagccaa
gctaaagatgatgaccttgactgggagcaagtcaacacaaaggtgaaaccatcttcagat
ccatggatgccatcaggtccaaccttcatgatggtaaacacctccgggaagttttcgggg
cagaaagcacaactcatgatgccacagctaaaagaaaatgacacccattgtataatcttc
aagtactatgtgtcaggcagagatggggtgaacccaggtctactgaatgtttatgtgaag
gctaacaatggtcctctggggagtccaatctggaatatgtctggagttgcaacaaggact
tggaaccaggtggagctggctatcagcacattctggcccagtttctatcaggttgtgttt
gaagtagtcacatcaggacaacatggatacttggccattgatgacgtggtccttcagggg
catcaatgtataaacacccctcacttcctgcatataaagggaatggaggtcaatgctggg
caaacagctactttccagtgttcagccaatggacagcacgaagacagctacaggttctgg
ttacagggaatggctgggcaggaagctccaatgaaggacatcaagccattgaacacacgc
cgtttcctagctacatttaatgtagtgaacacaactaagcaagacacagggagctaccgc
tgtttagttcaatcagaaaatggagttggattgtctaattatggtgaactggttgtaaga
cagccacccgttccaattgccccacctcagctcacggccgtcggggcaacgtacctgtgg
atccagctcaatgcaaactccatcaacggagacggcccgatcacacagagggaggtggca
tatcgcaccttgtctggaagcctgatcgacaaccagccggtagacaagagtacacacaaa
attggacacctggatccagatacggaatatgaaattagcgttctgctcacacgacctctg
gaaggtgggaccggagcccctggacctgctcttagagccaggacaaaatgtgcagatccc
atgcatggtccacggaagctggaagtggtggatataaagtccaagcaaatcaccgtccgc
tgggaaccttttgggtacaacgtgacccgttgcaacagctacaacctcactgtccactat
cgctaccaggtgggaacaaaagaggaggtcagggaagaagtgtgctatgaaacaaacagc
cacttccctcagcacaccatcagggagctgtctccctacaccaatgtcagcgttaaactg
gtgctcatgaaccctgagggcaggaaggagagccaggaattgggggtcctgaccgatgaa
gatgtgcctggtgaagtacctctagaatctatccagggaagcacatttgaagaaaagatc
tacctgcagtggagagagccagttcagacttatggcattatcacactctatgagatctcc
tataaggccgtcagctcctttgaccctgaattcgacttgtctaaccaaagcggaaaagtg
tttaaacacgggaacgagacacaccacctgtttgtgggcctgtaccctggatcaacatac
tcttttactgtcagagccagcactgtcaaaggctacgggcaacccgtcatcacccagttc
actactaagatatcagctccctgtatgccagcctatgatcaggagacacctttaaatcaa
actgacatcacggtgacagtgctgcttaaaccggcacagagcagaggggcacctgtcagt
gtctaccaggtcgtagttgaggaggaacgtcctcggagagccaaaaaggcagctgaaatt
ctgaagtgctacccagtgccagtccatttccagaacgcctctattttaaattcacagtat
tacttttctgcagagtttcctgcaagtgtcatccagtcctcccttccattcactgttggg
aacaataaaacctacaatggatattggaatgtccctcttctgcctcacaaaagctacagt
atttactatcaggctgtaagcacagcaaacggggaaactaaaatcgactgcgtcagagtt
gccaccaaagctgcgataatcgtgactcagcttacaacaccatacattcgcatcgcccct
gcttctggcgacaaccaactaacaggtactgccactctgaaacccgatgcagttgaacca
gagaaacagacggaccacactgtgaagatagcaggagtcatcgctggcattctcctcttt
gtcatcatcttcctgggggtcgtcctggtcatgaagaaaagaagaaactatcactcctac
acttattacctaaaacttgcaaagaaacgcaaagagacgcaaagcagcactcggcaagag
atgactgtgatggtgaactctatggacaaaagctacactgaacaggggacaaactgtgat
gaggcattctccttcatggacacccacaacctcaatggaagatctgtatcttcaccatct
tcatttacaatgaagaccaatacactcagcacgacggtgccagcttcttactatccagat
ccttttgtgccaactgcaattttagtgccaatcaatgatgaaaaccacacactagtgagc
gacacaagcagcctggtccagtcccactcctacaagaagagggaaccagtcgatgtgccg
taccaaacagggcagcttcacccagccatacgagtagccgacctgctgcagcacatcacc
cagatgaaatgtgccgagggctacgggttcaaagaggagtacgagagtttctttgaagga
cagtctgcaccatgggaatctgcaaagaaagatgaaaacagaatgaaaaacagatatggg
aatatcattgcatatgatcattctcgtgtccgactcctgcccctcgagggagaacaaaat
tcagattacattaatgcaaattatattgatggctaccacagaccgaatcattacatttct
acacaagggccaatgcaggaaacagtgtatgatttctggagaatggtgtggcaggaaaac
acagccagtatcgtcatggtgacaaatcttgtggaagtaggaagggtaaagtgctgcaaa
tactggcctgatgatacagagatctaccgagatatgaaagtgactctcatagaaacagag
ctgctgtctgaatatgtcatccgcacgtttgcagttgaaaagagaggagcccatgaaatc
agagagatcagagggttccacttcacgggctggccagaccatggtgtcccctatcatgcc
acaggtctcctagggtttgtccgaagaatcaagtccaagagcccagctaatgcaggtccc
atggttgtacactgcagtgccggagcaggcagaacaggctgcttcattgtcattgatatc
atgttggatatggcagaaagagagggagtggtggacatctacaactgtgtgcgcgagctt
cgatcacgcagagtcaacatggtccagacagaggaacaatatgtgtttatccatgatgcc
attctagaagcctgcctctgtggagacaccaccatcccagcctctcagctcaggtctgtt
tactacgagatgaacaggctggacccacagaccaactccagccaaatcaaagaggaattc
agaacattgaatatggtcaccccaactttacgagtggaggactgcagtatagcccttctc
ccccgaaaccatgagaagaaccgctgcatggacgtcctgcccccagacagatgtctccct
ttcctcatcaccatagacggagaaagcagcaattacattaatgcagcacttatggatagc
tacaagcaaccgtccgcattcattgttacccaacaccctttgccaaacacagtgaaagat
ttctggagacttgttttagactatcactgtacatcagtagtaatgctaaatgatgtggat
ccagcacagctctgccctcagtactggcctgaaaatggtgtgcatagacatggaccaatc
caagtggaatttgtatcagctgacctagaagaagacatcattagccgcatattcagaatt
tacaatgcagcaagacctcaggatgggtacaggatggtacagcagttccagttcctgggc
tggccgatgtacagagacacgcctgtgtcgaagcgctctttcttgaagctcattcgacaa
gttgagaagtggcaggaggagtatgatggtggggaggggcggacagtcgtacattgcctg
aatggtgggggccgcagtgggacgttctgtgcagtcagtattgtctgtgagatgctgcag
caccaacgcgtagttgatgttttccatgcagtcaaaacactgagaaacaacaagcccaat
atggtggacttactggatcaatacaagttctgctacgaagtagccttggaatacttaaat
ttggggtag
DBGET
integrated database retrieval system
