Polyodon spathula (Mississippi paddlefish): 121314482
Help
Entry
121314482 CDS
T07273
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121314482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314482
03036 Chromosome and associated proteins [BR:
pspa03036
]
121314482
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121314482
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121314482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
SAM_2
Glyco_hydro_2_N
Motif
Other DBs
NCBI-GeneID:
121314482
NCBI-ProteinID:
XP_041103743
LinkDB
All DBs
Position
4:35903083..36005410
Genome browser
AA seq
690 aa
AA seq
DB search
MIKMRSEDLKLSSVKKKKSKLSVSSKGEPEKYGFMEHQEEEETKVKNKMSSPHVNGKKKA
WCWDRYLEEQNAIAAPVKLFTEHQTFPSNNNGFKVGMRLEGIDPLHPSVLCVLSVAEVLG
HRIRLHFDGFSHCYDFWVNADSPDIHPVGWCKMTGHKLQPPKAYKKDGFDWESYLTACNV
QAAPKNLFKNQNTTVSPSGFQVGMKLEAVDRKNPSLVCVASIADVVGNRFLVHFDNWDDT
YDYWCNASSPYIHPVGWCQDNGRPLTAPQGYPNPENFSWEEYLEETGTSAVPVTSFKVRP
THGFLVNMKLEVVDKRNPMLLRVATIVDAEDYRIKVHFDGWSRKFDFWIDSDTPDIHPVG
WCARTGHPLELPLKPADLKTTTSQGVCPTPGCRGVGHIKGARYTGHHSAFGCPYSEINMK
KEMILHDRLGGEKQITFVPVHLTPKTKRLYCIDADERPEEYDMYSRSPVSEYNGVGSLRG
RHTAHQRLPGYPLAEKQDLKVKTEHNSHHQAQENKLFTPAVKKSKLQSRLAQSATYLKIK
EEEDDDDDDIDLHSQFRDYSVDNMQQALHQSVFLSAMSAQPNRDLPLCWEQHCKLLPGVA
GVQASRVANWTADEVASFVHSLPGCEEQAKQFKEEQIDGKAFLLLSQVDIVKIMSVKLGP
ALKIYNSILMFKNAEDMSKEMESGNAELDT
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgataaagatgcggagtgaagatttaaaattgtcatctgtgaaaaagaagaaaagtaaa
ttaagtgtcagttcaaaaggcgaaccagaaaaatatggttttatggagcaccaggaggaa
gaagaaacaaaggtgaagaataaaatgtccagtcctcatgtcaatggaaaaaagaaagct
tggtgctgggaccggtatctggaggaacagaatgcaatagcagcacctgtcaaactgttt
acagagcaccagacatttccatcaaacaacaatggctttaaagtaggcatgagattagaa
ggcattgatccactccacccatctgtgctttgtgtcctgtctgttgcagaggttttgggg
catcgcattaggcttcactttgatggcttttcacattgctacgatttttgggttaatgct
gattcacctgatattcatcctgtgggatggtgtaaaatgactgggcacaaacttcaacca
ccgaaagcttataagaaagatggatttgactgggaaagttacctaacagcttgtaatgtt
caagctgcaccaaagaatctgtttaaaaaccaaaatactactgtgtcaccatcaggattt
caagttggaatgaaactagaagcggttgacagaaagaacccttctctggtctgtgttgca
tccattgcagatgttgtgggaaatcgattcctggtgcacttcgataactgggatgataca
tacgattactggtgcaatgccagtagcccgtatatccatccagtaggatggtgtcaggac
aatggacgaccacttactgcacctcagggataccccaatccagaaaacttctcttgggaa
gaatatttagaagaaacaggcacttcagcagttccagttacatcttttaaagtgagacca
actcatggtttcctggtcaatatgaagcttgaggttgtggataaacgcaaccctatgttg
ttacgtgttgccaccattgtggatgctgaggattacagaataaaggtccattttgatggc
tggagtcgcaagtttgatttctggatcgattcagacacacccgatattcatccagtagga
tggtgcgcaaggacaggacaccctctagaattacccctcaaaccagctgaccttaagacc
acaacaagccagggagtgtgcccaacacctggatgcagaggagttggccacatcaaaggg
gcaagatacacaggacaccacagtgccttcggctgcccttactcggagattaatatgaaa
aaggagatgatacttcacgatcgtctcggaggagaaaaacaaattaccttcgtccctgta
catttgacaccaaaaacaaagaggctttattgtattgatgcagatgaaaggcctgaggaa
tatgatatgtattctaggagcccagtgtcggagtacaatggagtaggtagtctcagagga
aggcacacggcacaccagcgactgcctggataccctctggctgaaaaacaagacctgaag
gtcaagacagaacacaacagtcatcatcaagctcaggaaaataaactattcactcctgct
gtcaaaaaatctaagctacaaagcagacttgctcagtcagcgacgtatctgaaaatcaaa
gaagaagaagatgatgatgatgatgatattgacttgcacagtcagtttagagactacagt
gttgacaacatgcagcaggctcttcaccagtctgtcttcctgtcagccatgtctgctcaa
cccaatcgtgacctcccgctttgctgggagcagcactgcaaactgctgcctggagtggca
ggggtacaagccagccgcgttgcaaactggactgctgatgaggtggctagctttgtgcat
tctctccctggatgtgaggagcaagctaagcaatttaaggaagagcaaattgacggaaaa
gcattcttactgctcagccaagtggacatcgtaaagataatgagcgtcaaattgggccct
gctctgaagatctacaattccattctgatgttcaagaatgctgaagacatgagcaaagaa
atggaatctggaaatgctgagcttgatacatga
DBGET
integrated database retrieval system