Polyodon spathula (Mississippi paddlefish): 121314490
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Entry
121314490 CDS
T07273
Name
(RefSeq) homeobox protein AKR-like
KO
K19383
homeobox protein TGIF1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121314490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314490
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121314490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
121314490
NCBI-ProteinID:
XP_041103778
LinkDB
All DBs
Position
4:complement(36442213..36450168)
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AA seq
267 aa
AA seq
DB search
MKAKKGMLTLSGSETEDDDSMGVPLDLSATGNGKRKRRGNLPKESVEILRDWLYEHRYNA
YPSEQEKALLSKQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGSKMSESN
FIESSMSPKPLLSGSLDERSFHPSNSGPSLSSKPLSPKSPSPGTVLPRPSVICHTTITAL
QERPLHYCQTIMDKAATDLHSTKVSGLFKCHEEAETEGNSSPQSGLFNTPPPTPPDLTQD
FSGFQLLVDVALKRAAEMELQAKQLVS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctaaaaaaggaatgctaacgctgtctggcagtgaaaccgaggacgatgacagc
atgggtgtcccgcttgacctgtccgctacaggcaatgggaagaggaaaagacgtgggaat
ctgcctaaagaatcagtggaaattctgagagactggctttatgaacatcggtataatgca
tacccttctgaacaggagaaagcacttctctccaaacagactcatctttccacactacag
gtctgtaattggttcatcaatgctcgtcggaggcttctgccagacatgctgcgaaaagat
ggtaaagaccccaaccagtttaccatttcacgaagagggagtaaaatgtcagagtcaaat
ttcatagaaagctctatgtcccccaaacccttgctttctgggagcttggacgagagatca
ttccacccttctaactcgggaccaagcctatccagcaaacccctttcaccaaagagccct
tctccaggtacagtgcttcccaggccatcagttatatgccataccaccatcactgcactg
caagaaaggcccttgcattactgccaaacaatcatggacaaagcagccacagacttgcat
tccacaaaagtttccggtctcttcaaatgtcatgaagaagcagaaacagaaggtaattca
agccctcagagtgggcttttcaacactcctccccccactcctccagatctcacccaggac
tttagcggcttccagctcttggtggatgttgcactgaaacgagcagcagagatggaactg
caggcaaagcaacttgtgtcttaa
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