Polyodon spathula (Mississippi paddlefish): 121314536
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Entry
121314536 CDS
T07273
Name
(RefSeq) transcription factor AP-2-alpha isoform X1
KO
K09176
transcription factor AP-2 alpha/beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314536
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
121314536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
Motif
Other DBs
NCBI-GeneID:
121314536
NCBI-ProteinID:
XP_041103855
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All DBs
Position
4:40136862..40152701
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AA seq
471 aa
AA seq
DB search
MNQPIIEAQRTAELVSSEAEVKNKETRSTGNFSPSNKTVPVEMPLAYIEFSQDSEDRHDG
TSNGTGRLPQLGTVGQSPYPSAPPLSHTPNSDFQPPYFPPPYQPIYPQSQDPYSHVNDHY
SLNSLHAQPQPQHPGWPGQRQSQESSLLHQHRGLPHQLCRDYRRAEVLLPGGHGLDSGLD
SISIHGIPHSLEDVQHVEDQGINIPDQTVIKKGPVSLSKNNSSAVSAVPINKDGLFGGVV
NPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSL
REKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPSKAVAEYVNRQH
SDPNEQVQRKNMLLATKQICKEFTDLLSQDRSPLGNSRPQPILEPGIQSCLTHFSLISHG
FGTPAMCAALTALQNYLTEAIKAMDKMYLNNNPNSHSDSTKSGEKDEKHRK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcccatcattgaagcccaaagaacggcagaactcgtgtcttccgaggctgag
gtgaaaaacaaggagacacggagcacaggcaatttctctccaagcaacaaaaccgtgcca
gtggagatgcccctggcatatatcgaattttcacaagactctgaggatcgtcacgacggc
acaagcaatgggacaggcaggttacctcaattggggaccgtgggtcagtctccttaccct
agcgcccctccgctctctcacactccaaattccgatttccagcctccttacttccctcca
ccttaccagcccatttacccccagtcccaggacccttactctcatgtcaacgaccattac
tccctgaattccctccacgcacagccgcagccccaacatccaggctggccagggcaaaga
cagagccaagaatccagtttgctgcatcagcatcgcgggctaccccatcaactgtgcagg
gattaccgacgcgctgaagtccttctgcccggaggtcatggactcgattctggactagac
tctatctctatccacggaatacctcattctctggaagatgtacagcatgttgaagatcaa
ggcattaacatcccagaccaaactgtaattaagaaaggccctgtgtctctgtccaagaac
aacagtagtgcggtgtccgctgtcccaatcaacaaggacggtctctttggcggcgttgta
aaccctaatgaagtgttctgttcagttccgggtcgcctgtctcttctcagttcaacatca
aagtacaaggtcacggttgcggaagtgcaacgacgtctctcaccgcctgagtgcctcaac
gcctctctgttgggaggagtgctaaggagagcaaaatctaaaaatggagggaggtcttta
agagaaaaattggacaaaattggattaaacctgccagcaggtagacgtaaggcagcaaat
gttacactcctgacgtcactagtagaaggagaagcggtgcatcttgcgagggattttggt
tatgtatgtgagaccgaattcccgtccaaggcagtagctgaatatgtaaatcgtcaacat
tccgacccaaatgaacaagtccaaagaaaaaacatgctgctggcaacaaaacaaatctgc
aaagaattcacagacctactgtctcaagaccgatctcccttagggaactctaggccgcaa
ccaattcttgagccagggatccagagttgtttgacccacttcagtctcatttctcacggc
tttgggaccccagcaatgtgcgctgccctcaccgctctgcagaactatcttactgaggcg
atcaaagccatggacaaaatgtatctcaacaacaaccccaacagccattctgacagcacc
aaaagcggagaaaaagatgaaaaacacagaaagtga
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