Polyodon spathula (Mississippi paddlefish): 121314609
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Entry
121314609 CDS
T07273
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121314609 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314609 (washc5)
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Others
WASH complex
121314609 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
121314609
NCBI-ProteinID:
XP_041103982
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All DBs
Position
4:complement(50122196..50272675)
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AA seq
1161 aa
AA seq
DB search
MVDFLAENNLCGQAVLRIVSCGNAIIAELLRLSEFIPSIFRLKEKTDQQKYGDIICDFSY
FKGPEYYEGKLEAKPELQDLDEEFRDNNIEILSRFYFAFESVHKYIVDLNRYLEDLNEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVVDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPPNYPESYFQRVPISETFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVILFFTPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
LEAWEPYKAAKTALNYTLDQPNIREQASRYAGSIDRLRPQLQQFLKEGFLREEIVLDNIP
KLLNCLRDCNVAIRWLMLHTAESAYDPNNKRLRQIKDQVINDSKYSPKILFQLLLDIAQF
EFVLKEMFKQMLSEKQLKWESYKEEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQILSLNYEDSTAAGRKTVQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIIGDLSYAWQLIDSFTSIMQESIRASPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLAKIIKLQIHDIMEVPTRLDKDK
LRDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAF
ALHKGLIFNPKAKLQTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRII
NYNVEQECNNFLRTKVQDWQSVYQSTHIPIPKYPPVDESATFIGRLCREILRITDPKVTC
YIDQMNTWYDMKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLIMFQKT
VLMDRSVLDTLKALMNAVSPVKGIVGNASKVYSTAVAKTQKIWPSYLEAILKVGQMQILR
QQIANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNTLLYEIAAYLE
AAGVHNPLNKIYITTKRLSYFPIVNFLFLIAQLPKLHYNKNQGMTCRKSTDPIDWPPLVL
GLLTLLKQFHSRYTEQFLALIGQFIRSLMDQCTSQKIPEMPSDVVGGLMFLEDYVHDTKL
PRKVAEAHVPSFIFDEFRTIL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggtggattttttggctgaaaacaatttgtgtggtcaagcagtccttcggattgtgtcc
tgtggaaatgcaatcattgcagaacttctcagactttcagaattcattcccagtatcttc
agattgaaagaaaagactgatcaacagaaatatggagatatcatatgtgacttcagttat
tttaagggcccagagtactatgaaggaaagttggaggccaagccagagcttcaggattta
gatgaagaattccgtgataataacattgaaatactgtcacgcttttattttgcgtttgaa
agtgttcacaagtatattgttgatttaaacaggtatttggaggatcttaacgaaggtgtt
tacattcagcagacattagaaactgtactgctaaatgaagatggaaaacagcttttgtgt
gaagctctttatttgtatggcgtcatgttgctggttgttgaccagaaaatagaaggagaa
gtcagagagagaatgttggtgtcttattacagatacagtgctgctcgctcatctgcagac
tccaatctggatgatatctgcaagctgttacgcagcacagggtattcaagtcagccagga
gccaaacgtcctccaaactatcctgaaagttacttccagagggtacccatcagtgagacc
ttcatcagtatggtgataggccgtctgcgatcggatgacatctataatcaggtttcagct
tatcctttgccagaacaccgcagcactgcgcttgccaaccaagctgccatgctctatgtt
atcctgtttttcacaccttctattctccacactcaacaagccaagatgagggagattgtg
gataagtatttccctgataattgggttattagtatctacatggggatcacagttaattta
ctggaagcttgggaaccctataaagctgccaaaactgcacttaattatacactggatcaa
ccaaatatcagagagcaggcgagtcgatatgctggtagtattgatcggttgaggcctcag
ttacagcagtttctaaaagaaggcttcctgagggaggagattgtgctggacaatattcca
aaactgttgaactgccttcgagactgcaatgttgccatccgctggctgatgcttcacaca
gcagaatcagcttatgacccaaataacaaaagattgcgtcagataaaggatcaagttatc
aatgactccaaatacagtcccaagattctcttccagttactgttggatattgctcagttt
gagtttgttctaaaggagatgttcaagcagatgctgtctgagaaacaactgaaatgggaa
agctataaggaggagggttcagagcgaatgactgaactagctgaggtgttctctggggta
aaaccccttactagagtggagaagaatgaaaacctccaggcgtggttcagagagatatca
aagcagatcttgtctctgaactatgaggactccacggctgcggggaggaaaaccgtccag
ctgatccaggctttagaagaggtgcaggaatttcaccagctggaatccaacctgcaggtt
tgccagtttctggcagacactcggaagttcctccatcaaatgattcgcactataaacatc
aaagaagaggtgctgatcacgatgcagatcattggagacttgtcgtatgcttggcagctc
atcgacagtttcacatcaatcatgcaagagagcatcagagcaagtccatccatggtgaca
aaactgagagccactttcctaaagcttgcctcagctcttgacctgccactgctgcggata
aaccaggcaaacagccctgacctcttgagtgtctcccagtattactccggggagctggtt
tcctacgtcagaaaggtgttacaaatcattcctgagagcatgttcacctctctggctaaa
attataaagctgcagatccatgacatcatggaagtgccaacacggttagacaaggacaaa
ctgagagactacgctcagctgggtgctcgctatgaggttgccaagcttacacatgcgatt
tccattttcactgaaggaattcttatgatgaaaactaccttggttggcatcataaaggtg
gaccctaagcagttattggaagatggaataagaaaagagttggttagaagagttgcattt
gctcttcataagggtctcatctttaatcctaaagctaagcttcagacaagtgaactaatg
ccaaaactaaaggagatggctgctactatggatggattctatcgttcttttgagtacatc
caagactacgtcagcatctacggattaaaaatctggcaggaagaggtttcccgcattata
aactacaatgttgagcaggagtgcaataacttcctgaggaccaaggttcaggactggcaa
agtgtttaccagtccacccacattccaattcctaaatatccacctgtggatgaatctgca
acatttattggtcggctttgtagagagattctgcgaatcacagaccccaaagtgacctgc
tacatagatcagatgaacacgtggtatgacatgaagactcatcaggaggtcaccaacaat
agattattttccgagatccaggacacccttggaacatttggtttgaatggcctagacaga
cttctctgttttatgattgtgaaggaactacagaattttttgatcatgttccagaagaca
gttcttatggatagaagtgtgttagatacactaaaggcattaatgaatgctgtaagtcct
gtgaaaggaattgtggggaatgcaagcaaagtctactctacagctgttgcaaaaacacaa
aaaatctggccctcgtatttggaagcgatcctaaaggtgggtcagatgcagatattaaga
cagcagattgctaacgaattgaactactcctgtaagtttgactctaaacatctagcagct
gctctagagaacctgaacaaatctcttctggctgatattgaagctcattaccaggacccc
tcactgccatatccaaaagaagacaacactcttctgtatgaaatagcagcatatctggaa
gcagcaggtgtacacaatcctctgaataaaatctacataacaacgaaacgcctgtcgtat
tttcctatagtgaacttcctgtttctcatcgcccagttgccaaagctgcattacaacaag
aaccaaggaatgacttgtaggaagtccacagacccaatagactggcctccgttggttctg
gggcttctcaccttgctgaagcagttccattcaagatacacagaacagtttttggcccta
attggtcaatttatccgttctctgatggatcagtgcacaagtcagaagattccagaaatg
ccatctgatgttgttgggggtctcatgttcctggaagattatgttcatgacacaaaacta
cctagaaaggttgctgaagcccatgttccaagtttcattttcgatgaatttagaacgatt
ctgtga
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