Polyodon spathula (Mississippi paddlefish): 121314633
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Entry
121314633 CDS
T07273
Name
(RefSeq) catenin beta-1-like
KO
K02105
catenin beta 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04510
Focal adhesion
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05100
Bacterial invasion of epithelial cells
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121314633
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121314633
04520 Adherens junction
121314633
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121314633
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121314633
05100 Bacterial invasion of epithelial cells
121314633
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT_EZ
HEAT_2
Adaptin_N
KAP
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
121314633
NCBI-ProteinID:
XP_041104018
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All DBs
Position
4:complement(53510573..53524301)
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AA seq
780 aa
AA seq
DB search
MANQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDNQ
VLYEWEPGFTQSFTQDQVADIDSQYAMTRAQRVRAAMFPETQDEGMQIPSTQFDGAHPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDQSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAA
GILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMA
QNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLV
RAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQ
LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFR
MSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGEPLGYRQDDPSYRPFHS
GGYGQDAMGMDPMMDHDMGGHHPGAEYPVDGLPDLGHAQDLIDGLPPGDSNQLAWFDTDL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaggctgatttgatggagcttgacatggccatggagccagaccgtaaggca
gcagttagccactggcaacagcagtcctacttggattctggtatccactctggagctaca
accacagcaccttctctgagtgggaaaggcaatccagaagaggaggatgttgacaatcaa
gtcctgtatgaatgggagccgggtttcacgcagtctttcacgcaggatcaagttgctgat
attgatagccagtatgccatgacccgagcccagagggtacgggctgctatgttccctgaa
actcaggatgaaggaatgcagataccttccacacagttcgatggtgcacaccctactaat
gtccaacgtttggctgaaccatcccagatgctgaagcatgctgtggtcaatcttatcaat
tatcaggatgatgccgaactggcaacacgtgccatcccagagttgaccaagcttttgaac
gatgaggaccaggttgttgtaaacaaggctgcagttatggtccatcagctgtctaaaaaa
gaagcctcccgtcatgccatcatgcgctcaccccagatggtgtccgccattgtgcgcacc
atgcaaaacacaaatgatgttgagactgcacgctgcacagctggaactctccataacctt
tcacaccatcgtgagggcctgcttgccatcttcaagtcgggaggtatccctgccttagtg
aagatgctgggatcgccagttgactctgtattgttctatgccattacaactcttcataac
ctactcctgcaccaggagggagctaagatggctgtccgtcttgctggcggtctccagaag
atggttgccctgctgaataagaccaatgtcaaattcttggccatcacaacagattgcctt
cagatcttggcatatggcaaccaagaaagcaagctcatcattttggctagtggtggtcca
caggcactggttaacatcatgagaacctacacctatgaaaagctgctttggaccaccagt
agagtcttgaaggtcctttcagtctgttccagtaacaagcctgccattgttgaagctggt
ggcatgcaggccttaggactccacttaacagaccagagtcagcgtctggtgcagaactgc
ctatggaccctgagaaatctttcagatgctgctaccaagcaggagggtatggaaggtctt
cttggaacacttgtccagctcctgggttctgatgacattaatgttgtgacttgtgcagct
ggtatcttgtccaatcttacctgcaacaactacaagaacaaaatgatggtgtgccaagta
ggaggtatcgaggccttggttcgtactgttctccgtgctggtgaccgggaagacatcact
gagccagcaatctgtgctcttcgccacctaaccagcagacaccaggatgctgagatggcg
caaaatgcagttcgtctccactatggcctgcctgtggtagtaaagttgctgcatcctcca
tctcactggcctctgattaaggcaacagtaggacttattcgcaacttggccttatgccca
gcaaaccatgctcccctacgtgaacagggtgccattcccagactagtgcagttgttggtg
agagcacaccaggacacccagcgccgtacctctatgggtggaacacagcagcagtttgtg
gagggagttcgtatggaggaaattgttgaaggctgcacaggagctctgcacattctggca
agagatgttcataaccgaattgtcatcagaggactgaacaccattccactctttgttcag
ttgctgtattcaccaattgagaatatccagagggtagctgcaggagtactatgtgaactg
gctcaggataaggaagctgcagaggcaattgaggctgagggtgccactgctcctctcact
gagcttcttcactccaggaatgaaggtgttgccacttatgctgctgccgttctgttccgt
atgtctgaggacaagccacaagactacaagaaacgtctgtctgttgaactgacaagctcc
ctgttccgaactgaacctatgacttggaatgagactggagatcttggacttgatattgga
gcccagggagaacctcttggataccgtcaagatgatcctagctaccgtcccttccactct
ggtggatatgggcaggatgctatgggtatggacccaatgatggaccatgacatgggtggc
catcaccctggtgcagagtacccagttgatgggctgccagatcttggacatgcccaggac
ctgattgatgggttgcccccaggtgatagcaatcagctggcctggtttgatactgatctg
taa
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