Polyodon spathula (Mississippi paddlefish): 121314654
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Entry
121314654 CDS
T07273
Name
(RefSeq) adhesion G protein-coupled receptor B1-like isoform X1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04115
p53 signaling pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121314654
09143 Cell growth and death
04115 p53 signaling pathway
121314654
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121314654
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314654
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121314654
Peptidases and inhibitors [BR:
pspa01002
]
Mixed peptidases
Family P2
121314654
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Phagocytosis
Others
121314654
G protein-coupled receptors [BR:
pspa04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
121314654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
GPS
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
121314654
NCBI-ProteinID:
XP_041104047
LinkDB
All DBs
Position
4:complement(56411553..56522594)
Genome browser
AA seq
1611 aa
AA seq
DB search
MLYILYISPEKGSRMGRVAFAHLWLAVSWPTLLLALTSAASSSPSGPASDKCTTLVQGKF
FGYFSSSSVFPYNNGGASASPCSWIIQNPDPRRYTLYMKVSKPTSCCNPRIVRTFQYDSF
LETTRTYLGMESFDEVLKLCDTSTRHAFLQSGKQFLQMKKLVSRDEPSSALAGNGEFMAE
YLVVGNRNPSVPACQVLCKWLENCLVSSTAARPCGIMQTSCQCWDVPPRKQDSCYRGGIY
LENCIPSMKESNRDAEIVGGWSLWGPWAECNSVCGGGVQMRSRTCQAPLEEAFLCEGVLE
EGRPCNKQPCTPNGRYSSRSQALRSVDYRKREETEEALRYGYPSSQTVDPAAEEWSPWSV
CSTTCGEGWQSRTRFCVSSSYSTQCSGPLREQRQCNNSAVCPASLIAVHGAWDEWSPWSL
CSSTCGRGYRDRTRTCKPPQFGGNPCEGPEKQTKFCNIALCPVDGNWNEWSSWSSCSASC
SNGTQQRIRECNGPSYGGSECHGHWVETRDCFLKQCPVDGKWQLWGLWGSCTKTCDGGMQ
KRERICYGPFFGGEECPGPQEESRLCNEKRCPEPHEICEEENYAKVVWKKTPSGEAAAMR
CPPNASGLILRKCTLDEEGIAYWEPPTYMKCVSNDYRSIQIMTREHLSKAQRGLIGDGVS
DIIKNLMELSQDGTSYSGDLLAILDVLKNMTEIFRRAYYSPKAVDLQNFVQVVSNLLSEE
NRERWDEAQLMGPNAKELFRLVEDFIDVIGFRVNDFRDSYQITENLVLSIHKSTANGATD
ITFPKKVWRGMVDWARNSEDKVTISKSILSTGVQDVDDSSLFVIGTVLYRNLGSVLYLQR
NNTVLNSRVISVIIKPTPNALSTPLEIEFSHLYNGTTNQTCISWDETDITSPLGAWSTRG
CRAIPVNSFRTKCVCDRLSTFAILARLNPDMNMDKVLMPSVTLIVGCGVSSLTLLLLIII
YVSVWRYIRSERSVILINFCLSIISSNVLILIGQTQTRNKVVCTLVAAFLHFFFLSSFCW
VLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAVSVGFTKAKGYGTINYCWLSLE
GGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDGITDKKLKERAGQMTVPLYSMTLKCAK
CGVVSSADVSSTATSNAMASLWSSCVVLPLLALTWMSAVLAITDRRSALFQILFAVFDSL
EGFVIVMVHCILRREVQDAVKCRVVDRQEEVNGDSGGSFQNGHAQLMTDFEKDVDIACRS
VLNKDILSCRSNSILGTLKRSSLQEDEKLATQQLSYQKGVNFNSLPTNMTKLHLQNIADY
STHTLTLKKDKSGGELPSTKSIYICDGELFKQLDADLTRTQTENSVPDGSSYVLLPSNTS
TLRAKPKKDPAEYNISIDQLTQTRLIHLNMAEGEPGTGFGLKTLPADRVSVSCSERDSPV
QKVQNISSDSQVTNSMCDAGDSGNSGMMSKSETVSTLSMSSLERRKSRYAELDFEKIMHT
RKRHQDMFQDLNRKLQHAERESPPGDSKSVKRWSVSSGGSDKTNLTQDKQQTPNKRVWEG
IRKTHSPPSWVRKDLETLQASPLELKSVEWEKAGATIPLVGQEIIDLQTEV
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgttatacattctctacatttcacctgaaaaagggtctaggatgggaagagttgctttc
gctcacttgtggctggcagtctcctggccaacactgctactggcattgacctctgccgcg
tcctcctccccgtctggccctgcctctgacaaatgcaccaccctggtccaggggaaattc
tttggatacttctcttcatcttctgtcttcccttacaacaatggtggagcgtcggcctcc
ccttgctcctggatcattcagaacccagacccacggcgctacaccctctacatgaaggtg
tccaagcccacctcctgctgcaacccacgcatagtcaggacatttcagtatgattctttc
ctggagacgactcgcacctacctgggcatggagagctttgatgaggtcctcaagctctgt
gacacctctacccggcatgcctttctacagtctggcaagcagttcctgcagatgaagaag
ctagtgtccagggatgaaccctcatcagccttggctgggaatggggagttcatggcagag
tatctggttgtgggtaacaggaaccctagtgtgcctgcctgccaagtgctctgtaagtgg
ttggagaactgcctggtctccagtacagcggctcgcccctgcggcatcatgcagacctcc
tgccagtgctgggatgtgccacccaggaaacaagacagctgttaccgtggagggatatat
ctggagaactgcatccctagcatgaaggagagcaacagggatgctgagatagtgggtggc
tggagtctgtggggcccctgggcagagtgtaacagtgtctgtgggggaggggtgcagatg
cgcagccgcacctgtcaagcaccgctcgaggaagccttcctgtgcgagggggtgttggag
gagggacgaccctgcaacaagcagccttgcacacccaatgggcgctacagctctcgaagc
caggccctgcgctccgtcgactatcgcaagcgtgaggaaactgaggaggctctgcgctac
ggatacccctcttcacagacagtggacccggcggcggaggagtggtccccctggagcgtt
tgctccaccacgtgtggcgagggctggcagagtcgaacacgcttctgtgtgtcgtcctcc
tacagcacccagtgtagcggccccctgcgcgagcagaggcagtgcaacaactctgccgtc
tgtccagcctctctaattgcagtgcacggggcctgggatgaatggtcaccatggagcctg
tgttcatccacctgtgggaggggctacagagaccgcacccgcacctgcaaacccccacag
tttgggggtaacccctgcgaggggcccgagaagcaaaccaagttctgtaacatcgccctc
tgccccgtggatgggaactggaatgagtggtccagctggagctcgtgttcagcctcctgc
tctaatgggacccagcagcgaatccgtgagtgcaatgggccctcgtacggtgggtctgag
tgccacggccactgggtggagaccagggactgcttccttaaacagtgcccagtggacggg
aagtggcagttgtggggtttgtggggcagctgtacaaagacatgtgacggcggcatgcag
aaacgagagaggatctgctacggacctttcttcgggggggaggaatgccctggaccccag
gaagaatcccgtctctgcaatgaaaagcggtgtccagagcctcatgagatctgcgaggag
gagaattacgctaaagtggtgtggaagaagactccgtccggagaagctgccgcaatgcgc
tgtcccccaaatgcctcggggctgatcctgcggaagtgcactctggatgaggaggggatt
gcttactgggagccacctacctacatgaaatgtgtctccaatgactacaggagcatacag
attatgacgagggaacacctgtcaaaagcacagagaggtctgattggggatggggtgtca
gacatcatcaaaaacctgatggagctctcccaagatggcacaagctacagtggagacctt
ctggccatcttggacgtgctcaagaacatgactgagatcttccggagggcgtactacagc
cccaaagctgtggacctgcagaactttgttcaggttgtctcaaacttgttatcggaagag
aaccgggagcgatgggatgaggcacagctaatgggtcccaatgccaaggagctgttccgt
ctagtcgaggacttcattgacgtcattgggttccgtgtgaacgacttcagagactcctac
cagatcactgaaaacctcgttctgagtatccacaagagcacggctaacggtgccacagac
atcaccttcccaaagaaggtctggagggggatggtggactgggcacggaactcagaggac
aaggtcaccatctccaagagcattctctccacgggagtgcaagatgtggatgactcctct
cttttcgtgattggaactgtactgtacagaaacctgggcagtgttctttatctgcaaagg
aacaatactgtgctgaactccagggtgatttcagtcataataaagccgactcctaatgct
ctgtccactccgctggagattgagttttcccatctctataatggcaccacgaatcagacc
tgcatctcctgggacgagacagacatcacctcaccgcttggagcctggtctaccagaggc
tgcagagcgatccctgttaattcgttcagaaccaaatgtgtctgtgacagactctccacc
ttcgccattttagcacggctaaatcctgatatgaacatggacaaggtcctcatgccctct
gttaccctgatcgttggttgtggggtctcctcactcactctgctcctgctcatcatcatc
tatgtgtctgtctggaggtacattcgttcagagcgatccgtcatcttaatcaacttctgc
ctgtcaatcatctcctctaatgtcctcattctgattggacaaacacagaccaggaacaag
gtggtctgcaccctggtggcagcattcctgcacttcttcttcttgtcttcgttctgctgg
gtgttgacggaggcctggcagtcctacatggctgtcacaggcaggctgcgcaatcgcatc
atccgcaagcgttttctgtgtctgggctggggtctgcctgctctagtagtagctgtgtct
gtggggttcaccaaagccaaaggctatggcaccataaactattgctggctctctctggaa
ggaggtctcctctatgcttttgtaggaccggcagcagcggttgttctggtgaacatggtt
attgggattctggtttttaacaaacttgtttccaaagatgggataacagataagaaactg
aaggagcgggcaggtcagatgacagttcccctgtacagtatgacgctcaaatgtgccaag
tgcggagtagtctcatcagctgacgtttcctccacagccaccagtaatgccatggcgtcg
ctgtggagctcctgcgtggtcctgcccctgctggctctcacatggatgtctgcggtgttg
gctatcacagaccgacgctctgccctctttcagatcctttttgctgtgttcgactcactc
gagggctttgtcattgtcatggtccactgtatcctgcgcagagaggtgcaggacgctgtg
aagtgccgtgtagtggaccgtcaggaggaagtcaatggagactccgggggatccttccaa
aatggacatgcccagctaatgacggatttcgaaaaagatgtagacatcgcgtgcagatca
gttctgaacaaggacatcctctcatgccggtcgaactccatcctaggcactctcaagcgg
tcctcgcttcaggaagacgaaaagttggcaactcagcagctcagctaccagaagggggtc
aactttaacagcctccccaccaacatgaccaagctgcacctgcaaaacatagctgactac
tccactcacacactgacgctgaagaaggataagagcggtggcgagctgccctccaccaag
tcaatctacatctgcgatggagagctcttcaagcagctggacgcagacctaacccggact
cagacagagaactcagtccctgacggcagcagctacgtgcttttgcctagcaacacctca
acgttgcgggccaagcccaagaaggatccagctgagtacaacatcagcatcgaccagctt
acgcagaccaggctgatccatctgaacatggctgagggggagcctggcacaggcttcggg
ctgaagactctgcctgcggaccgtgtcagtgtctcctgctcagaacgtgactcacctgtc
cagaaggtgcagaacatctccagtgattcccaggtgaccaacagcatgtgtgatgccggg
gattctggaaactcaggaatgatgtccaagagcgagactgtctccaccctctccatgagc
tccctagagaggcggaaatctcggtacgcagaattagattttgagaagatcatgcacaca
cggaaacggcatcaagacatgtttcaggacttgaacaggaagctgcagcatgcagagagg
gagtcaccgccaggggatagcaagtctgtgaagcgctggagtgtctcatctggggggagt
gataaaacaaacctcactcaggataaacagcagacgccaaacaagcgagtctgggagggg
atccgcaagacgcactcccctccctcatgggtgcgcaaggacctggagaccttacaggca
tcccccctggagctgaagtctgtagagtgggagaaagctggggccaccataccccttgtg
ggccaggaaatcatagacctgcagacagaagtctga
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integrated database retrieval system
