Polyodon spathula (Mississippi paddlefish): 121314676
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Entry
121314676 CDS
T07273
Name
(RefSeq) neurobeachin-like protein 2 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121314676
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Others
121314676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4800
Beach
NBCH_WD40
DUF4704
PH_BEACH
Neurobeachin
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_Vps41
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
Beta-prop_HPS5
WD40_like
WD40_MABP1-WDR62_2nd
GRAM
Motif
Other DBs
NCBI-GeneID:
121314676
NCBI-ProteinID:
XP_041104104
LinkDB
All DBs
Position
4:complement(58525344..58650734)
Genome browser
AA seq
2780 aa
AA seq
DB search
MASKERLYELWMLYFNKKDLVYLQQWLEAFVTSFEKIIDVNSLDPRRPEECASEIPLLPQ
DLLQVLSSQLAHSTQRLSSKQQEEEEEEEENGVGQTLLLIKVLIIICRNLENIEDNQTPG
FIYETMRLLSFCITELKSVAGEHSPLQSVVLYGLHLWECVFDPYQTWRRQLTGEIVSVQE
RSKYKFSPVSLPEEFTAFFHESFKDSDNLPEILRVRLVHLYGAIIIGCKRNALLAIVPSA
VSDLMGVLSSCCCPDNQEMKDPQLLQLTLKCLTAVIHLLHASSLDQRQVDIRTVLDSYFW
VLNSDHLGAGAGEGEARDWEDRLITLRTSMLRAIPEMLNCADRPVLQAIFLNNNCFEHIL
RLIQNSKLYVSSRCKMECDGACDLTTQLLTEIDINQVFEKGSDSITVHALRVLTAIMTSS
PSAKEVFKERIGYSHLYDVLLSQGQTTRQLLQELMNMAVEGDHTQVPAVRINNEQPLLLL
VQWIPELTSCDLQVLISDWLCRACGSTLGNRTTAVQAGLVSALLDVLSDHHRLDKKCADQ
LIELLQSLGALSLPPGELKRLLLLLRPESGATHPYCSRVVQALSAMAGREGVDSALQYFD
LTPSMAGIMVPAIQRWPGYGFSFHAWLCLNMQPLHVPTLQHRLDKGPRRKQLYSFFTASG
TGIEAFFTAEGMLVVAVCTKKDYMTVALPEVSFSDSAWHSVDIVHIAGRRPFGQNLVNIF
VDGLLRKSAQLRVPSLSEAFTSCCIGSAGHRTTTTTATPTLPSPQHPPDSPFLSQAPTLS
RSQSFPASFSGPATRDCLVHTIPAGNQDAEWGSPTSLGGMLGTAFVCHEALQPAQVKALH
SAGPNSMSPFKSDGELSDLSSKLLLYYTPKACKNHICLDLSPHHQYDGRLTGHKVVNWDV
RDVINCVGGMGVLLPMLEQVSCQTEESGTLQEIADLVGLELTFSHNTPSMLLPLGKSSDG
RLERNSVASFLLMVKNFLRHHPVNQESLVQCQGPAIMGALLQKVPSQLMDMSVLMACQHL
TEQVGSEGNSVLLHYLYQHLLFDFRIWSRSDFAVRLGHIQYVSSIIKDNKQRIRRKYGVQ
YILDSIRTHYGGEKDDAVPVDDVRTVQTSLFQLVREFLSRTVAPEELQSVLSYAAAVQDE
QQVCGVLEVLHGLLRGGPTREQLFGLLFDTGHVEVLYSLLVQKKYSDELRERVFKILYKI
MKFDKVPERSKHRLKLKDIGYQGLISYLNEVPVSMCLIRCLSEQVLAADVNPNYRDLIAV
VYLSRRADLTVRLDVCRKLFHLIYTNQDNMRQLARQAGWQDTLTMLYVKESYESRETSLS
SSPNCDALDLPRQGPTMLEDPQEAGATATATAGDLSDVFLPFGYETPDTDISEGFSDLSL
SPGNSSCPQRMKMKSYGNSFDSQDATSRSSSNTIDIPGAQEEESPYSPFSPFRSSPFELG
LELTSTGSLAAVESGSQTPVSQADTPSPLEAFKPFPGMRACKSSSLSNVLDESSFQEPQP
GDNTSNTSNPQQTPEEELCNLLTNIVFSVTWRGVEGSDDAVWKERGQVFSVLTKLGSSCE
LVRPPDDIKRSLLEMMLESAFSDIKDTGATLPGHIQNVVKLLRLLQDFLFTEGQANQALW
SEKIFEGVVNLLDRLQAWCYPVNGATDMREMPQIGLRIIIGYIQQQNAQVCAMACVKLHS
LLQTVLSLRREEVCFLLGRLDGPLSHSLAGGRADSFTYLVPIVRTLLDQHYEMLELPFLL
PNMPSTNGSVTLFEDLQNYCSAVEWQTFIEKHIQPVMAQYEDDTFGKSHDLMSNFWNSCF
DALMSSSLRREKEKADSRAKFQELIVEPYLKRVRSENLRYANMLKQMNNHHSTVLRQWRS
LRRLLTCQRGAWAERKEVEVMWKLSSAETYSKMRLKLVPNYNFDSHSEASALRDNMGADH
LHSPTESIPLAVAKEAKVSEMEDDQLGDEDLVFLDNQVDEEEQNQKEKLVISEDCELITI
VAVIQGRLEVTTQHIYFYDGSAEKEETEEGIGLDFKRPLSQLREVHLRRYNLRRSALELF
FIDQAHYFINFKKKVRNKVYSRILGLRPPNLFYFGSRSPQELLKASGLTQKWVCREISNF
EYLMQLNTIAGRTYNDLSQYPVFPWILYDYSSDTLDLDNPAIFRDLSKPIGVVNSRHAMD
VKEKYESFEDSTGTIDKFHYGTHYSNAAGVMHYMIRTEPFTTLHIQLQSGRFDCADRQFH
SVHAAWQARMENPVDVKELIPEFFYFPEFLENMNGFDLGSLQMSLDKVHDVVLPKWAESK
EDFIRKHRKALECEHVSAHLHEWIDLIFGYKQRGPAAVEALNVFYYCTYEGAVDLDAIAD
ETERKALEGIISNFGQTPCQLLREPHPPRLSAENAARRLARFENSPPNLLDHLSELKAFV
ESISDNVSLVQAVVPKNQARSFITQGYPDLLITVSASGLLGTHSWLPYDKNIANYFSFSK
DPTISNPKTQRFLLGPLSPGVELTSKILVVSHDGKLLFSGGHWDNSLRVTALGKGKVVGQ
LSRHIDIVTCLALDLCGIYLISGSRDTTCMVWQVQQQGGFSCGLAPKPIQVLYGHNDEVT
CVAISTELDMAVSGSKDGTLIVHSVRRGQFLRTLQPACERSLPVTISDLVVGLEGHIVTQ
TILQGRSTVKDKFSLHLYSINGKLLASVVLEEQVSAMCLTQEHVILGTVQGSLYIRDLYS
LKVMMSPLALKVPVHSVSITKENSHILVGLGDGKLIVVGAGQPSEVKTGQFTRKMWGSKR
RISQISSGETEYNPTETANK
NT seq
8343 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaaggaaagattatacgaactctggatgttgtactttaacaagaaggacctc
gtctacctgcagcaatggctggaggcgtttgtgacctcgtttgagaaaatcattgatgtc
aactccttggatcccaggcggccagaggagtgtgcctcagagatccccctgctcccccaa
gacttgctgcaagtcctgagcagccagcttgcccacagcacccagcgcctcagcagcaag
cagcaggaggaggaggaggaggaggaggagaatggagtgggacagaccctgctgctcatc
aaggtccttataattatctgcaggaatcttgagaatattgaagataaccaaactccaggc
ttcatctacgagacaatgaggcttctctctttctgcatcactgagctgaagagcgttgca
ggggagcacagccccctgcagtcggtggtcctgtatggtttgcacctgtgggagtgtgtg
ttcgacccctaccagacctggaggaggcagctgactggggaaattgtgagcgtgcaggag
aggagcaagtacaagttctcgcctgtctcactgccagaggagttcacagctttcttccat
gagagcttcaaggacagtgataatctgccggagatcctgagggtgcgattggtccacctg
tacggcgccatcatcattggctgcaagagaaatgccctgctggccatcgtcccctcagcg
gtgagtgacctcatgggggtcctcagttcctgctgttgccctgacaaccaggaaatgaag
gacccgcagctgctgcagctgaccctgaagtgcctgaccgctgtgatccacctcctgcac
gccagcagtctggaccagcggcaagtggacatcaggaccgtgctggacagctacttctgg
gtcctcaactctgatcaccttggcgcgggggctggggagggggaggcaagagactgggaa
gaccggcttatcaccctccgcaccagcatgctcagagctatccctgagatgttaaactgc
gctgatcggccggtccttcaggccatatttctgaataacaactgtttcgagcacattttg
agactgatacagaacagcaagctttatgtgagcagtaggtgtaagatggagtgcgatggt
gcatgtgatctcactacacagttactgacagaaattgatatcaaccaggtgtttgaaaaa
ggctcagactccattactgtccacgctctcagagtcctcactgccatcatgaccagctct
ccgtctgcaaaggaggttttcaaggagaggattggctactctcacctgtatgatgtgctg
ctgagccagggccagacaaccaggcaactcctccaggagctcatgaatatggctgtagaa
ggagaccacacacaggttccggctgtgcggatcaacaacgaacagcctctcctcctgctg
gtgcagtggatccctgagctcacctcctgtgacctgcaggtgctgatatctgattggctg
tgccgggcctgcgggagtacactgggcaaccgcaccaccgcggtgcaggcggggctcgtg
agtgctctcctggacgtgctgtccgaccaccaccgcctggacaagaagtgtgcagaccag
ctgatcgagctgctgcagtcactgggggccctttccctaccccctggggagctcaagcgc
ctgctcctgctgctgaggccagagtcgggggccacgcacccctactgcagccgcgtggtt
caggccctctctgccatggccgggcgcgagggggtggacagcgccttgcagtacttcgac
ctgacacccagcatggccggcatcatggtgcctgctatccagcgctggcccggctacggc
ttctccttccacgcctggctctgcctcaacatgcagcctctgcacgtgccgaccctgcaa
cacagactggacaagggaccacgcaggaaacagctctatagttttttcacggcgagcggg
accgggatcgaggctttcttcacagctgagggtatgctggtggtggcggtctgcaccaag
aaagattatatgaccgttgctttgcccgaggtgtccttcagtgactctgcctggcactct
gtagatattgtgcacattgccgggcggcgccccttcggtcagaacctggtcaatatcttt
gtagatggactgctgcgcaagtctgctcagctcagagtcccgtccctcagtgaggccttc
acctcctgctgtatcggctcggcagggcaccgaaccaccaccaccacagcgacccccacc
ctgccctccccccagcaccctccagactcccccttcctgagtcaagcgccaaccttgagc
cgctcccaatcttttccagcctccttctctggacccgccacccgggactgcctggtccac
accatccctgcggggaaccaggatgcagagtgggggagtcccacctccctggggggcatg
ctgggcactgccttcgtctgccacgaggccctgcagcccgcccaggtcaaggctctgcat
agcgcaggacccaacagcatgtcccccttcaagtcagatggggagctgtcagacctcagc
agcaaactgctgctctactacactccaaaggcctgtaaaaaccacatctgcctcgacctg
tctcctcaccaccagtacgatggcagactgactgggcacaaagtggtcaactgggacgtc
agggatgtgataaactgcgtgggagggatgggtgtgctactgcccatgctggaacaggtg
agctgccaaactgaggagtccgggaccctacaagagattgcagacctggtgggactcgag
ctcaccttctcccacaacacccccagcatgctgctgccactgggcaagtcctcagatggc
aggctggagcggaacagcgtggcctccttcctgcttatggtgaaaaacttcctgcgacac
catcctgtcaatcaagagagcctggtgcagtgtcaggggccagccatcatgggggcgctg
ttgcagaaggtgccaagccaactgatggacatgagcgtgttgatggcatgccagcacctg
actgagcaggtcggcagtgaggggaacagcgtcctgctgcactacctctaccagcacctg
ctcttcgactttcgcatctggagccgcagcgacttcgctgtccgccttggacacattcag
tatgtatcatccatcatcaaagacaacaagcaaaggatccgcaggaaatacggagtgcag
tacatcctggactccatcaggacgcactacgggggtgagaaggacgatgcggtcccagtg
gatgatgtgcggacggtgcagacttctctcttccagctggtccgagagttcctatcgcgg
actgtggctccagaggagctgcagagtgtcctgtcatacgcagccgctgtccaggacgag
cagcaggtgtgcggagttctggaggtgctccacgggttgctgcgtggaggccccacacgg
gagcagctcttcggattgctcttcgacacgggccacgtcgaggtgctgtactcactcctc
gtgcagaagaaatacagtgacgagctgagggagagggtcttcaagatcctgtataagatc
atgaagtttgataaggttcctgagaggagtaaacaccgtctgaagctgaaggacattggc
taccagggcctgatcagctacctaaacgaggtcccagtctccatgtgtctcattcgctgc
ctctcagaacaggtcctcgccgcagatgtgaaccccaactaccgggatctgatcgcagtg
gtgtacctgtctcgcagagcggatctcactgtcagactggatgtctgtcgtaagctcttc
cacctcatctacacgaaccaggacaacatgcgtcagctggcgcggcaggctggctggcag
gacactctgactatgctgtacgtgaaggagtcgtacgagtctcgggagaccagcctctcc
agttccccaaactgtgacgcactggacctgccgcggcaggggcctaccatgctggaggac
ccacaggaagcaggggcaacagcaacggcaacggccggggatctgtcagatgtcttcctg
cccttcggctatgagacccccgacacagatatctctgagggcttctcagacctctctctg
tccccaggcaacagcagctgcccccagaggatgaagatgaagtcctacgggaactccttc
gactcccaggacgcgaccagccgctcttcctccaacaccatagatatccccggggcccag
gaggaggagtccccctactccccgttctccccattcaggtcctccccttttgagctgggc
ctggagctgaccagcacaggctcgctggccgccgtggagagtggcagccagacccctgtc
agccaggccgacaccccctcccccctggaggcctttaaacccttcccgggcatgagggca
tgcaagagctccagcctgtccaacgtgctggacgagagcagcttccaggagccccagcct
ggggacaacacctccaacaccagcaacccccagcaaactccagaggaggagctatgtaac
ctgctcactaacatcgtgttctctgtgacgtggcgtggggtggaaggcagcgacgatgct
gtctggaaggagcgtgggcaggtcttctccgtcctcaccaagctgggctcgtcctgcgag
cttgtccggccccccgacgacatcaagcgcagcctgctggagatgatgctggagtctgcc
ttttcagacatcaaggacacaggggccacgctgcctggccacatccagaacgtggtcaag
ctgctccgcctcctgcaggactttctcttcaccgagggccaagccaaccaggcgctctgg
agtgagaagattttcgaaggggttgttaatctgctggacaggctgcaggcctggtgctac
cctgtgaacggggccacagacatgagggagatgccccagattggcctgcgcatcatcatt
ggctacatccagcagcagaacgcacaggtgtgtgcgatggcctgtgtgaagctgcacagc
ctcctgcagacggtgctgtctctgcggagggaggaggtctgcttcctgctgggcaggttg
gacgggccgctctctcactcgctggcgggcgggcgtgcagactccttcacgtacctggtt
cccatagtgagaaccctgctggaccagcactacgagatgctggagctgccctttcttctg
cccaatatgccctccaccaatggcagtgtcaccctgtttgaggatctgcagaactactgc
agcgctgtggagtggcagacattcatcgagaagcatatccagcctgtcatggctcagtac
gaagatgatacgtttgggaagagccacgacctgatgtctaacttttggaattcttgtttt
gatgcgctgatgagcagctctctgcggagagagaaggagaaggctgatagcagagccaag
ttccaggagttgattgtggagccctacctgaagagggtgcgctctgagaacctgcgctat
gcaaatatgctgaagcagatgaacaaccaccacagtactgtgctgcgacagtggagatcc
ctgaggagactgctgacctgccagagaggggcctgggcagagaggaaagaggtggaggtg
atgtggaagctgtcgagtgcggaaacctactccaaaatgaggctgaagctggtccccaat
tacaactttgattctcactctgaggccagcgctctgcgggacaacatgggtgctgaccat
ctgcacagccccacagagtccatcccactggccgtggccaaagaggcgaaggtcagcgag
atggaggatgaccaactgggggatgaggacctggtctttctggacaatcaggtggacgag
gaggagcagaatcagaaagagaagctggtgatctcagaggactgtgagctcatcaccatc
gttgccgtgatacagggtcgtctggaggtcaccacacagcacatctatttctacgatggc
agcgcagagaaggaggagactgaggaaggaattgggttagatttcaagcggcctctgtcc
cagctgagggaggtgcacctgcgacgttacaacctacgcaggtcagccctggagctgttc
ttcatcgaccaggcacactacttcatcaacttcaagaagaaggttcgaaacaaagtgtac
tctcggatcctgggtctccgtcctcccaaccttttctactttgggtctcgctcaccccag
gagctgcttaaggcgtctgggctcacacagaaatgggtgtgcagagaaatctccaacttt
gagtacctgatgcagctgaacaccatcgctggcaggacctacaacgacctctcccaatac
cctgtgttcccctggatcctgtatgactacagctccgatactctcgatctagacaaccct
gccatcttccgcgacctctccaaacccatcggagtggtcaacagccggcacgccatggac
gtgaaggaaaagtacgagagttttgaggactccacaggcaccattgataaattccactat
ggcacacactactccaacgcagcgggagtcatgcactatatgatccggactgagcccttc
accaccctgcacattcagctgcagagcggcaggtttgactgtgcagacaggcagttccac
tctgtgcacgcagcctggcaggcacgcatggagaaccccgtagacgtgaaggagttgatc
ccggagttcttctacttcccagagttcctggagaacatgaacggcttcgacctcggctcc
ctgcagatgtctttagataaagtgcacgacgtcgttctaccaaagtgggctgaatccaag
gaggacttcatccgaaagcacaggaaagcgctggagtgtgagcatgtgtctgcccacctg
cacgagtggattgacctgatctttggatacaagcagaggggacctgctgcagtggaagca
ctcaatgtcttctactactgcacctacgagggcgctgtggacctggatgccattgcagac
gagacagagaggaaagctctggaggggatcatcagcaactttggacaaactccctgccag
ctgctgagggagccccatcctccccggctgtctgctgagaacgccgcgcggcgactggct
cgctttgagaacagcccccccaacctcctggatcacctgtctgagctcaaggcctttgta
gagagtatcagtgataacgtttccctggtccaggctgtcgttcccaaaaaccaggcccgc
tctttcatcacccagggctatccagacctgctgatcacagtcagtgccagtggattgctg
ggaactcacagctggctgccctacgataaaaacattgccaactacttcagcttcagcaag
gacccaactatctccaaccccaagacccagcgtttcctgttgggacccctgtcccccggt
gtggagctcacctcaaagatcctggtggtctcgcacgacgggaagcttctattcagtggg
gggcactgggacaacagcctacgggtgactgcactgggcaaggggaaagtggttggacag
ctcagcaggcacatcgacattgtgacgtgcctggcgctggacctctgtggaatctacctc
atctctggctcacgggacaccacctgcatggtgtggcaggtccaacagcagggtgggttt
tcctgtggtctggctccaaagccgattcaggtcctctatggacacaacgatgaggtcacc
tgtgtagccatcagcaccgagctggacatggcggtctcggggtcaaaggacggcacattg
atcgtgcacagtgtgcggagggggcagttcttgcgcaccttgcagccagcctgtgagcgc
tctctcccggtcactatctccgacctggtcgtggggctggagggacatatcgtcacacag
accatcctgcaggggaggagcacggtcaaggacaagttttctctgcacttgtactctatt
aatgggaagctgcttgcgtcggtggttctggaggagcaggtgtcggcgatgtgcttgact
caggagcacgtcatcctgggtacagtgcagggctccctgtacatccgagacctttacagt
ctgaaggtgatgatgagccctttggcgctgaaggtcccagtccacagtgtatccatcacc
aaggagaacagccacatcctggtgggactgggagatggcaagctcattgtggtgggggcc
gggcagccctccgaggtgaagacgggccagttcactcggaaaatgtggggctcgaagcgc
cgcatctctcagatctcttcaggtgagacggagtacaaccccacagagacagctaataaa
tag
DBGET
integrated database retrieval system
