Polyodon spathula (Mississippi paddlefish): 121314700
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Entry
121314700 CDS
T07273
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121314700
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121314700
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
MOEP19
DUF1598
PilE_C
Motif
Other DBs
NCBI-GeneID:
121314700
NCBI-ProteinID:
XP_041104161
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All DBs
Position
4:60459208..60862492
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AA seq
463 aa
AA seq
DB search
MNMNMDMPMNINTKEGKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARI
NISEGSCPERIVTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPGS
QCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML
ESPPKGATIPYRPKSASAPIIFAGGQVRADTILASAGNHTVLTQPQQAPTFAIQGQYAIH
PDVSPAHLTKLHQLAMQHSPFTPLGQTNPGFPGLDATTSTSSHELSIPNDLIGCIIGRQG
SKINEIRQMSGAQIKIANAIEGSAERQVTITGSPANISLAQYLINASLEMAKISTQTASV
TNPVDLNMNLSQSATPTSTPTSMAVLAAAAAASAAVNINSPPPLPTTHYAVPVSSLLGMK
TVPFLALNAAAAAGAMGSLSAYTTKIPSTSGVKKSDRQKFAPY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaacatggacatgcccatgaatataaatacgaaggaggggaaagtgtccgaa
ggggggctcaatgtcacattgactattcggctactaatgcatggaaaggaagtcggaagc
attattggaaaaaaaggggaaacagttaaaaagatgagagaagagagtggtgctcgaatc
aacatttcagaaggatcctgcccagagaggattgtcacaattaccggccccacagatgcc
attttcaaagccttttccatgattgcacttaagtttgaagaggacataaatgcttcaatg
acaaacagtacagtgacaagtaaaccgcctgtgacgctgagattggtggttcctggaagc
cagtgcggctcattaataggaaaaggagggtccaagatcaaggaaatcagagagaccaca
ggagctcaggtacaagtagcaggggacatgctgccaaactccacagagcgagctgtaact
atctcaggcactccagatgccatcatccagtgtgtaaagcagatatgtgtggtgatgcta
gagtccccacccaaaggtgccactatcccctaccgccccaaatctgcctctgcacccatc
atattcgcgggtggccaggtcagagcggacaccatcttggcttcagcaggaaaccacacc
gtcctgacacagccacaacaagcacctacttttgcaatccagggacagtatgccattcat
ccagacgtgagtcctgcgcatttgaccaagcttcaccagttggctatgcagcattccccc
tttactccccttgggcagaccaaccctggtttccctggtcttgatgccacaacgtctacc
agttcccacgagctctcaattccaaatgatttaataggctgcattattggcagacaagga
agcaagatcaatgaaatcaggcagatgtcaggggcacagatcaagatcgccaacgccatt
gaaggttcagcggagcggcaggtcacaatcacagggtctcctgcaaacatcagtttagca
cagtacctcatcaatgcaagcttagagatggctaaaatcagcacccagactgcttccgtc
acgaaccctgttgacctcaacatgaacctctctcagtctgccacccctacctccaccccc
acctcaatggctgttctggcagcggcggccgctgcttccgccgcggtcaacatcaattcc
cctcctcccttaccaaccacccactatgctgttcctgtctccagtctgcttggcatgaaa
actgtcccattcctggcattaaacgctgcggccgcagcgggggccatggggagtttatct
gcttataccactaaaatcccatcgaccagcggggttaagaaatctgatcgacagaagttt
gctccgtattga
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