Polyodon spathula (Mississippi paddlefish): 121314709
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Entry
121314709 CDS
T07273
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03430
Mismatch repair
pspa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121314709 (mlh1)
03460 Fanconi anemia pathway
121314709 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121314709 (mlh1)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121314709 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121314709
NCBI-ProteinID:
XP_041104200
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Position
4:complement(61699036..61714913)
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AA seq
750 aa
AA seq
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MAGVIRRLDEIVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQKFEDLSAISTYGFRGEALASVSHVAHVTITTKTADGT
CAYRASYCDGKLKAPPKPCAGNQGTQISVEDLFYNVSTRRKALKSASEEYSKIVEVVSRY
AIHNSGKSFAVKKHGETVADVRTLPNASTVDNIRAIFGNAVCRELIEVGCEDPSLAFNVK
GYVSNANYSVKKCIFLLFINHRLVESSALKKAIETVYAAYLPKNMHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDSIVESVQKHIESKLLGSNSSRTYFTQTLLPGPAVSSGDVLKPA
SSSAAAGASDRVYAHQMVRTDFRAQKLDAFLQPANKTQTEPSEQAVSECCSSRQPEQRDV
DMQELNDADLLAGISGDLDIEDFMGDVKETGDSENSSLVNPPPRKRHRIDSDVEMKDDER
AGAMTAASVPKRRIIKLTSVKELRCEISEQAHKGLQEMLQNHSYVGCVNPQWALIQHQTK
LYLLNTTKLSQALFYQILIYDFGNFGVLRLSTPAPLYDLAMLALESPESGWTEEDGPQEG
LAQYIVEFLKKKSEMLLDYFSMEIDEDGNLAGLPLLLDNYIPALEGLPMFILRLATEVNW
DDEKECFESFSRECSMFYSIRKQYILEDPALLEQQTEELGSSGTSWKWTVEHVVFKAFRT
LLAPPKQFTEDGSILQIANLPDLYKVFERC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtaatcaggaggcttgacgagattgtcgtaaatcgaattgctgctggagag
gttatccagcggcctgcaaatgccatcaaagagatgatagaaaattgtctagatgccaaa
tcaaccagtattcaagtgacagttaaggatggtggactgaagctaattcagatccaggac
aacggcacaggtatccggaaagaagacatggaaatagtttgcgagcgattcaccaccagt
aaactgcagaaatttgaagatctctcagccatatctacgtacggatttagaggggaggca
cttgccagtgtaagccatgtggcccatgttactattacaactaaaacagctgatggaact
tgtgcatacagagctagttattgtgacgggaaactaaaggcacctccgaaaccatgtgct
ggaaaccaaggcacgcagatttctgttgaagatctcttttacaatgtgtcgacgaggagg
aaagcactgaaaagcgccagtgaagaatactctaaaatagtagaggtagtcagcagatat
gctatacacaactctggtaaaagctttgctgtgaaaaagcacggggaaacagttgcagat
gttagaacattaccaaatgcttcaacagtggacaacatccgagcaatctttggaaatgct
gtttgcagggagttaattgaagtgggttgtgaagatccaagtctggcttttaacgtgaaa
ggctacgtctcaaacgcaaactactctgtgaagaagtgtatcttcttgcttttcattaac
catcgtttggttgaatccagtgctctgaagaaagccatagaaactgtttatgcagcttac
ctcccaaaaaacatgcatcccttcttgtatcttagcctggagattgcccctcacaacatt
gacgtgaacgtacaccccactaaacacgaagtgcatttcctgcatgaggacagcatcgta
gagagtgtgcagaagcatattgagagtaaactgctggggtccaactcctcccgcacatac
ttcacccagactttgctgcctggccctgctgtctcttctggtgatgtcctaaagccagcc
tcctccagcgcagctgcaggtgccagcgacagagtgtacgctcaccagatggtgcgcacg
gatttccgggctcaaaagctggacgcatttctacagccggcaaataagacacaaacagaa
ccctcagagcaggcagtgtctgagtgctgctcatccaggcagccagagcagcgtgatgtc
gatatgcaagagctgaacgacgcagacttgttagctggcatatccggggatctggatatt
gaggacttcatgggcgacgtgaaagaaacaggagactccgaaaactcctctttagtgaac
cctcctcctcggaagcggcacaggatagattccgatgtggaaatgaaggatgacgagagg
gctggtgccatgactgctgcgtctgtgccgaaaaggcgtattatcaagctaaccagcgtc
aaggagctgaggtgtgaaatcagcgaacaggcacataaaggcctccaggagatgctgcag
aatcactcttacgtgggctgtgttaatcctcagtgggcactgatacagcaccagaccaaa
ctctaccttctgaacaccaccaagctcagccaagcgctgttttaccagatcctgatatat
gactttggcaattttggagtcctaaggctatctacacctgctcccttgtatgatctggca
atgttggcactggagagccctgaaagtggctggactgaggaggatgggcctcaagagggg
ctggcacagtatattgttgagtttctcaagaaaaagtcagaaatgctacttgattatttt
tcaatggaaattgatgaggatgggaaccttgctggattacctttgctgttagacaattac
atccctgctttggagggactgcccatgttcatcttgcggctagccacagaggttaactgg
gatgatgaaaaggagtgttttgaatctttcagccgggaatgtagcatgttttactccatc
agaaaacagtacattttggaggacccagctctacttgaacagcagactgaagagcttggg
tcaagtgggacatcgtggaagtggaccgttgagcatgtcgtttttaaagccttcagaaca
cttcttgctcctcctaaacaatttacagaagatgggagtattctacaaattgctaacttg
ccagatctttacaaagtctttgagaggtgctga
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