Polyodon spathula (Mississippi paddlefish): 121314735
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Entry
121314735 CDS
T07273
Name
(RefSeq) F-box/LRR-repeat protein 2-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121314735
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121314735
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
LRR_6
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_RPS2
F-box_4
Motif
Other DBs
NCBI-GeneID:
121314735
NCBI-ProteinID:
XP_041104261
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Position
4:64230199..64304214
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AA seq
433 aa
AA seq
DB search
MNGISKGRFEVFSNNDEAPINKKLPKELLLRIFSYLDVITLCRCAQVSKAWNVLALDGSN
WQKIDLFNFQTDIEGRVVENISKRCGGFLRQLSLRGCLSVGDAAMRTFAQNCRNIENLNL
NGCTKITDSTCISLSKFCSKLKFLDLTSCVTLTEHLCFKSLIEGCRNLEHLNISWCDQMT
KDGIEALVRGCGGLRALFLRGCTQLDDEALKHLHKHCPELMTINMQSCTLVSDEGLVSLC
RGCHKLEILCLSGCSNITDASLTALGFNCPRLKILEGARCSHLTDAGFTVLARNCHELEK
MDLEECILVTDNTLVQLSIHCPRLQALSLSHCELITDDGIRHLSNSACGHERLQVVELDN
CPLITDLTLEHLKSCPNLERIELYDCQQVTRLGIKRIRAHLPEIKVHAYFAPVTPPPSVG
GSGQRLCRCCIIL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcatcagcaagggcaggtttgaggttttctcaaacaacgatgaggcacctatt
aacaagaagcttccaaaagaactcctacttagaatattttcctatctggatgtgattacc
ttgtgccgatgtgcccaggtgtctaaggcgtggaatgtcttggcattggatggaagtaac
tggcaaaaaatagacttgttcaactttcagacggatatagagggtcgtgtggtggagaac
atctcaaagcgttgtggagggttcctacggcagcttagtctcagggggtgtctcagtgtg
ggggatgcagcgatgaggacgtttgcacagaactgcagaaacattgaaaatttaaacctt
aacggttgcacaaagatcactgacagcacatgtattagccttagcaaattctgttccaaa
ctgaaatttttggacttaacatcgtgtgtgactctaactgaacatctctgttttaagagt
cttattgagggctgcagaaatctggagcacctgaacatttcttggtgtgatcaaatgact
aaggatggtattgaagctctggtgagaggatgtggcggtctaagagctttatttcttaga
ggctgcacacagctcgatgatgaagcactgaagcaccttcacaagcactgtccagaactc
atgacaatcaacatgcagtcttgtacactggtctcagatgaaggattagtaagtttatgc
agaggatgtcataaacttgaaattctgtgtctctccgggtgttcaaacatcactgatgct
tccctgacagcccttgggttcaactgccccaggctcaaaattcttgagggtgcaagatgt
tcccatttgacagatgctggtttcacagttttagccaggaattgtcatgagctggagaag
atggatttagaagaatgtattctggtcactgataacactcttgtccagctctctattcac
tgtcctagactccaggctctgagtctatctcactgtgagcttatcacggatgacgggatc
cgtcacctcagtaacagcgcctgtggacacgagcggctgcaggtggtggagctggacaac
tgtcctctgatcactgacctcaccctggagcacctgaagagctgccccaatctggagagg
attgagctgtacgactgccagcaggtcacccgcttgggaatcaagaggatccgggcacac
ctgccggagatcaaggttcatgcctactttgcccctgtcaccccccctccctcggtgggc
ggcagcggccagcgcctctgcagatgctgcatcattctttga
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