Polyodon spathula (Mississippi paddlefish): 121314750
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Entry
121314750 CDS
T07273
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121314750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121314750
03032 DNA replication proteins [BR:
pspa03032
]
121314750
Spliceosome [BR:
pspa03041
]
Complex A
U1 snRNP components
Sm proteins
121314750
U2 snRNP components
121314750
Complex B
U1 snRNP components
121314750
U4/U6.U5 tri-snRNP components
121314750
Complex C
U2 snRNP components
121314750
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121314750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Hfq
Gemin7
Phage_Hfq
DUF7879
Motif
Other DBs
NCBI-GeneID:
121314750
NCBI-ProteinID:
XP_041104323
LinkDB
All DBs
Position
4:64825057..64830520
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVCMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtacgatttttgatgaagttgagccatgaaaccgtaaccatagagttgaag
aatggaacacaggtacatggcacaatcacaggtgtggatgtatgtatgaacacccatctc
aaagccgtcaaaatgacattaaagaaccgtgagcctgtccaactggagacgctgagcatt
cgtggaaacaatattcgctacttcattctgccagacagcttgcctctggacaccctgctg
gtggacatcgaacccaaagtcaagtcaaaaaagagagaagcagttgcagggcgagggcga
ggccgaggcagggggcgaggccgggggagaggcagagggagaggtggaccgaggagataa
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