Polyodon spathula (Mississippi paddlefish): 121314752
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Entry
121314752 CDS
T07273
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04621
NOD-like receptor signaling pathway
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121314752 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121314752 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pspa04054
]
121314752 (nod1)
Pattern recognition receptors [BR:
pspa04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121314752 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
WHD_NOD2
LRR_4
FumaraseC_C
AAA_22
AAA_16
AAA_30
NPHP3_N
ATPase
Motif
Other DBs
NCBI-GeneID:
121314752
NCBI-ProteinID:
XP_041104325
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All DBs
Position
4:64873037..64895184
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AA seq
948 aa
AA seq
DB search
MGTHGGFAVERQSVCTKSYRLLTVHRELLVSQVKNIQCVLDNLVRSGFFCTEDAEIILRF
STKTDQVRKILELVQSKGEEVCQYFVHILHEAYDAFIDLRPWFEEIQYQPPEQIQSIPVI
NTDPVSKYCEKLRRELGHDTKFIISYAQREEMLLDEMYTDTLMELVNDRNESQGYLDSLD
ELFSDNGVFNQDAETILILGDAGTGKSILLQKLQNLWSKREPSIRAKFFFKFRCRMFCVF
KETDEISLKDLLFKYNCYPDKDPEDEVFKYIQRFPEMVLFTFDGYDEIHSDFDLSSIPEV
CSPDEKTHPLLLLMNLLGGKLLKGSKKVLTARTGTEIQNKVVRKKLILKGFSPESLRKYT
TMHFKERTYQTLVLNQLEANPHLCSLCSIPLFCWIIFKCFEHFQSVYENYQLSDLYVTIT
DVFLLMSEVFLSRLTNLSLLKKSSRCQSETFRSGREILIAFGKLAHQGIEKTSFVFDHEE
ITSLHIAEKEMRLGFLRPIGHYDGCGNPTTFEFVHVTLQSFFTAFSLVVDEDVGCKDILK
FFAECEYRKARHFPRFPMMSCIHPSKPRDKDPFRNNEHFQFTNLFLCGLLSRAKVSLLEH
LVSPKMLKKKREVLKSYLSDSVKSHLKNLPRFKSEEEGCKVHGMSNFIWMLRCVFETQSE
EVGKLTAKGISADYIKLTYCNAYSADCSAFSFVLQHCRKPIGLDLDNNNINDYGVKQLQP
CLSKLSVVRLSVNQITDCGVEVLAKELVKTKIVKVLGLYKNQITDAGAQWVAKIIEECPS
LRMLKIGCNKITSKGGKLLAYAIQKSKTIFDVGMWGNTIGDEGAIAFAEALRNHPSLTNL
SLSANLISTEGGKSLAAALKENSSVNIFWLVQNQLNDEVARCFAETIKVNTALTHLWLID
NKVTVEGAKILSQALLENKTLKEICLKGNLLSLEEEEAFTSVKRLFFN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccatggtgggtttgctgtggagagacaaagcgtgtgcacgaagagctacagg
cttcttacagtgcatcgggagttattggtctctcaagtgaagaacattcagtgtgtcctg
gacaatttagtacgcagtggcttcttttgcactgaagatgcagagattattctgcggttt
tccaccaaaactgaccaggttcgtaaaatcctggaactggttcagagcaaaggagaggag
gtctgtcaatattttgtgcacattcttcatgaggcctatgatgccttcatagacctgaga
ccctggtttgaggagattcagtaccagccaccagagcaaatccagagtatccctgtgatc
aacacagatcccgtgagcaagtactgtgaaaagcttcgtcgtgagctgggacatgacacc
aagttcattatctcgtacgcgcagagagaggagatgttgctggatgagatgtacacagac
actctcatggagctggtgaacgatcgcaacgagagccagggctacctggacagcctagac
gagctgttcagcgacaacggcgtctttaaccaagatgcagaaaccatcttaatccttggg
gatgctggcacagggaagtccatcttgctccagaaacttcagaacctgtggtccaaaagg
gagccaagcattagggccaagttcttcttcaaattccgctgcaggatgttctgcgtcttc
aaagagacagatgagatatcattgaaggacctgcttttcaagtacaactgctacccggac
aaggatccagaggacgaagttttcaaatatatccagcggtttccggagatggtgctgttc
acctttgatggctatgatgagatccactctgattttgacctgagcagcattccggaagtc
tgctcgcccgatgagaagacacacccgctcttgctgctcatgaacctgcttggcgggaag
ctgctaaaaggatctaagaaagtcctgacagcaaggacaggcactgagatccagaacaag
gtggtcaggaagaaactcatcctgaagggattttccccagaaagcttgcggaaatacacc
accatgcacttcaaagaaaggacttaccagaccttggtgctaaaccagctggaggcaaac
cctcatctatgcagcctgtgttccatccccttgttttgctggattatattcaaatgcttt
gaacatttccagtcagtttatgagaactatcagttgtctgacttgtacgtcaccatcact
gatgtctttctgctgatgtcggaggtttttctcagtcgcttaaccaatctcagcttgctc
aagaagagcagccgatgccagagtgagaccttcagatctggtagagagatcttgattgct
tttggaaagctagcccaccaaggaatagagaagacaagctttgtcttcgaccatgaagag
atcacatctttgcacattgcagagaaggagatgcgccttgggttcctcagacccattggt
cattacgatggctgtggaaaccccaccacctttgagtttgtccatgtgaccctccagtcc
ttcttcactgcattttccctggtggtggatgaagatgtcggctgcaaggatatcttgaaa
ttctttgcagagtgtgagtatcgcaaagcaaggcacttccctagatttcccatgatgtct
tgtattcacccttccaaaccgcgggacaaagaccccttcaggaacaacgagcactttcag
ttcaccaacctcttcctgtgtggactgctgtccagggccaaggttagtctgcttgagcac
ctggtgtcacccaagatgctgaagaagaagcgtgaagtcttgaagtcctacctgtcggac
agtgtgaaatcccacttgaaaaacttaccacggttcaagtctgaggaggaggggtgcaaa
gttcatgggatgtccaacttcatctggatgttgaggtgtgtcttcgagacccaaagtgaa
gaggttggtaagctgactgctaaaggaatctctgccgactacatcaagctgacctactgc
aatgcctactccgctgactgcagcgcattcagctttgtcctgcaacattgcaggaaacca
attgggctggatctggacaataacaacattaatgactatggggtaaaacagctccagccg
tgtctcagcaagctgtctgtggtaagattgtctgttaatcagatcactgactgtggagta
gaagtcttagcaaaggaacttgtaaagaccaaaattgtcaaagttctaggactttacaaa
aatcaaataacagatgctggagcccagtgggttgcaaagatcattgaagaatgcccaagt
cttaggatgcttaaaattgggtgcaacaaaattacaagcaaaggtggaaaattgctggca
tatgcaattcagaagagtaaaactatctttgacgtgggaatgtggggtaacaccattggt
gatgaaggggcaatcgcctttgcagaagccttgaggaatcaccccagtctaacaaacctc
agcctttcagccaatctcatctctacagagggaggaaaaagtttagctgctgcattgaaa
gagaacagctcagtgaatatattttggctagtgcagaatcaattgaatgatgaagttgcc
aggtgctttgcagaaacgatcaaagtcaacacagcattgacccacctgtggttaatcgat
aacaaggtcacagtagagggtgcaaaaattctttcccaagctctgctggaaaacaaaaca
ctaaaagagatctgcctgaaaggaaaccttctgtctttggaagaagaggaggcttttaca
agcgtgaagcggctattcttcaactga
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