Polyodon spathula (Mississippi paddlefish): 121314756
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Entry
121314756 CDS
T07273
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121314756
03036 Chromosome and associated proteins [BR:
pspa03036
]
121314756
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121314756
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Topoisomerases
121314756
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121314756
Centrosome formation proteins
Centriole proteins
121314756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
121314756
NCBI-ProteinID:
XP_041104334
LinkDB
All DBs
Position
4:65380746..65437564
Genome browser
AA seq
1618 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKNNAARKEEANAKNDGAKTEGSKKEGSKKMSVERVYQKKTQL
EHILLRPDTYVGSVEPVTQQMWVFDEDVGMNLREITYVPGMYKIFDEILVNAADNKQRDK
NMSCIKITIDPESNIISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTG
GRNGYGAKLCNIFSTKFTVETASKEYKHSFKQIWLNNMTKTSEPKIKYFDGDDYTCITFQ
PDLPKFKMEKLDKDTVAILTRRAYDIAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDKLD
ETGVALKVVNETVNDRWEVCLTMSEKGFQQISFVNSIATTKGGRHVDYVVDQIVSKLIEV
VKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCPLSEKFIR
SATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSADCTLILT
EGDSAKSLAVSGLAVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKK
SYDDPESLRTLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLRHSFLEEFITPIVKA
TKNKQQLAFYSIPEFDEWKKQTENYKTWHIKYYKGLGTSTGIEAKEYFADMDRHRIMFKY
AGPEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTQTKHLTYNDFIN
KELILFSNSDNERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHG
EQALMMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTLLSSLSRLLFPA
VDSNLLKFLYDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRLL
SNQEPLPMLPSYKNFKGTIHELGQNQYMVSGEIIVVDKNTIEITELPFRTWTQTYKETVL
EPMFTGTEKTPALISDYKEYHTDTTVKFVVRMTEEKLAQAEAAGLHKVFKLQSSLTCNSM
VLFDHMGCMKKYETVLDILKEFFELRLHYYKLRKDWLVGMLGAESAKLSNQARFVLEKIE
GKISIENKSKRDLIRMLVQKGYESDPVAAWNKAQEKLLEDNADNDDDTSSIDSGSTSGPN
FNYILSMPLWCLTKEKVQELLKQRDSKKMELDDLERKTPSDLWKEDLAAFVEELDRVEAQ
EKEDMMAGKAAKLVKGKVGKPKVKKLQLEETLPSPYGRRIVPQITQAMKADASRKMTKKK
KGEVDSMAVKIEFDEELDEMTEEGSGLNSINTSVITPRNTPAVKVKTPRVKKEKKEPGTP
RARKTPTAKGTPKKTKKRNPWSDDESKSESDLEDREPVVIPRDTKSQRSSAAKPKYTFDF
SEEEDNDDDDDDYIRTAPSPVRSYKDDDFVPSESRDRYEEDDFPSAKSTSLADPASPAEK
NHEPAIVFSTTSLNCDKNNDSDSLKFDSDDEGSAHVFSSLSSSTTFDKLPAAKKVKKPSD
GLPKPKKTPKPKKFKTTAWESDLEFGVPKKSATPKGKGRGRKRKPQSGSEEEDEYSPAKK
TGKAPTSRKSKKVVSEDDDFDTNFGRSETSSRERPGRAKKEVKYFAESDDEDAFEMFD
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacggagcagcaggaagcggaggtttgacttgggtgaccctctttgataagaac
aatgctgccagaaaggaagaagcaaatgccaagaacgatggtgccaagactgaaggctcc
aagaaggagggttcaaagaagatgtcagtggagcgagtttatcagaagaaaacccagctg
gagcacatcttactccgtccagatacttacgttggttctgttgaaccagtaacccagcaa
atgtgggtttttgatgaagatgttggaatgaatttaagagaaattacctatgttccgggc
atgtacaagatctttgatgaaattcttgtaaatgcagctgacaataagcagagggacaaa
aacatgtcctgtattaaaataacaatagacccagaatcaaacattatcagcatttggaac
aatggaaaaggcattcctgttgtggaacacaaagatgagaaaatgtatgtacctgctttg
atctttgggcatctcttaacatcaagcaactatgatgatgatgagaaaaaagttacaggt
ggaagaaatggctatggtgcaaaactttgtaatattttcagcaccaaatttacagttgaa
accgcatccaaggaatacaaacatagtttcaaacagatctggttgaacaatatgacaaaa
accagcgagccaaaaattaaatactttgatggggatgattacacctgcattacattccag
ccagacttgccaaagtttaagatggagaaactggataaagatactgtagccatcctgaca
aggagagcttatgatattgctgggtcttgtaaaggagtcaaagtcatgttcaatggaaag
aaactgcctgtcaatggattccgcagctacgtagatctgtacgtaaaagacaagctggat
gagaccggcgttgcactgaaggtggtaaatgagactgtgaatgacagatgggaagtgtgt
ctcacaatgagtgagaaaggctttcagcaaatcagctttgtaaatagcattgccaccaca
aagggtggcagacacgttgattatgtggttgatcagattgttagtaagctcattgaagtc
gtgaaaaagaagaacaaagcaggagtttcagtcaaaccttttcaggtgaagaatcacatc
tgggtttttgtcaacgcactgattgaaaacccgacctttgattcccaaacaaaggagaac
atgactctccaaaccaaaagctttgggtccaagtgtccactttcagagaaattcattaga
tcagcaactaattgtggcattgttgaaagcatcctcaactgggtaaaatttaaggcccaa
acacaactgaacaaaaaatgttcttcagtgaaatacagcaaaattaaaggtatcccaaaa
cttgatgatgccaatgatgctgggggcaagcattccgctgactgcacactcattctgact
gaaggagattcagccaaatccttagcggtgtcaggtctggctgtcattggtcgggatcgg
tatggagtctttccacttaggggtaaaatcctaaatgttcgagaagcatctcacaagcag
attatggaaaatgcagaaatcaacaacattatcaaaatagttggtctgcaatacaagaaa
agctatgatgatccagagtctctaagaacactccgctatggaaagattatgatcatgact
gatcaggatcaagatggctctcacatcaaaggcttactcatcaacttcttccatcacaac
tggccatctctgcttaggcacagcttcttggaagagtttatcactccaattgtgaaggcc
accaaaaataaacaacaattggcattctacagcatacctgagtttgacgaatggaagaag
cagacagaaaactacaaaacatggcacatcaagtactacaaaggtctgggcaccagcact
ggaatagaagcaaaagagtattttgcagatatggacaggcacaggatcatgtttaaatat
gctggtcctgaagatgatgctgccattactctggccttcagtaaaaagaaaacagatgac
agaaaagagtggctcacaaacttcatggaagataggcgacaacggaggatgcatggcttg
ccagagcaatatctttatggaacgcaaacaaagcacctaacctacaatgacttcattaac
aaggaactgattctgttctcaaactctgataacgaaaggtcgattccatctcttgtcgat
ggtttgaaacctggtcaaaggaaagtcttattcacttgcctcaaaagaaatgacaaacga
gaagtcaaagttgctcagcttgctgggtctgtcgctgaaatgtcagcatatcatcatggt
gagcaagctttgatgatgactattgtaaacttggctcagaactttgttggaagcaacaat
gtgaacattctgcagccccttggtcagtttggtactaggattaatggtggcaaggatgct
gccagtcctcgttacatcttcacattgctaagttctttgtcaagattgctgtttccagcg
gtggattctaatttgctcaagttcctttatgatgataaccaaaaagttgagccagagtgg
tacattcctatcatccctatggtgctagtaaatggagcagaaggtatcggcacaggatgg
gcttgcaaaattcctaactacgaccccagagagattgtgaacaacatcaaccgattgctt
agcaaccaggaaccgttaccaatgcttcctagttacaagaactttaaagggactatccat
gaattgggtcaaaaccaatacatggtcagtggggaaatcattgtggtggacaagaataca
atagagataacagaacttccatttagaacatggacacagacatacaaagaaacagttctt
gagccaatgtttactggaactgagaagactccagctttaataagtgactacaaggagtat
cacacagacacaacagtcaaatttgtggtacgaatgacagaggaaaaactagctcaagca
gaagctgcgggactccataaagttttcaaactccagtcgagtctaacgtgcaactccatg
gtgctttttgaccatatgggctgtatgaagaaatatgaaacagtgctagacattttgaag
gaattctttgaattgaggttgcattactataagttacgaaaagactggctcgtaggaatg
ctgggagcagagtctgccaaactttccaaccaggcacgatttgtcctagagaagattgag
ggaaaaatctccattgaaaataaatcaaagagggatctaattcggatgcttgttcagaag
ggctatgaatccgatcctgtggcggcctggaataaagcgcaagaaaagttgctggaagat
aatgcagataatgatgatgatacaagctccattgactctggctcaacatctgggcctaat
tttaattacatcctaagtatgcctttgtggtgcctcacgaaagagaaagtacaggagctc
ttaaaacagagagattctaagaaaatggagcttgatgaccttgaaagaaaaactccatct
gatctttggaaggaagacttggcagcatttgttgaagaacttgatcgagtggaagcccaa
gaaaaggaggacatgatggctggaaaagctgcaaagctagtaaaggggaaagtaggcaaa
ccgaaagtaaagaaattacagctggaggagacgttgccttcaccttatggacgcagaatt
gtgccccagatcactcaagccatgaaagcagacgcatccagaaagatgactaaaaagaaa
aagggagaagtagactccatggcagtgaaaattgagtttgatgaagaactggatgaaatg
acagaagaaggaagtgggctaaactccatcaatacatcagtaataacaccaagaaacaca
ccagcagtcaaagtcaagactccacgtgtaaagaaagaaaaaaaagaaccaggcactcct
agggcaaggaaaactccaactgccaaaggaacccccaagaagaccaagaaaagaaaccct
tggtcagatgatgaatccaaatcagaaagtgacttggaggacagggaacctgttgtaatt
ccacgagacacaaaatctcaaagatcctctgctgcaaagccaaaatatacctttgatttc
tctgaagaagaggacaatgatgatgatgatgacgattatataagaactgcaccttcaccg
gttaggagttacaaagatgatgactttgtaccctcagaaagtagggaccgatatgaggaa
gatgacttcccttcagctaaatcaacatctctagcggacccagcttctccagcagagaaa
aaccatgaaccagcaattgtattttcaacaacatctttgaactgtgacaaaaacaatgac
agtgattcattgaagtttgacagcgatgatgaaggtagtgcacatgtattttcatcgctt
tctagctcaacaacctttgataaattacctgctgcaaagaaagtaaagaaaccttcagat
ggattgcctaaacctaaaaaaactccaaagcctaagaagtttaagacaacagcctgggaa
tcagatttagagtttggagttccaaagaaatctgcaactcctaaaggtaaaggtcgaggg
aggaagagaaaaccccagtctggctccgaggaggaagatgaatactctcctgcaaaaaag
acagggaaagctcctacaagcaggaaatctaagaaggttgtttcagaagatgacgatttt
gacacaaactttggcagatcagaaacctcttcaagagaaaggccaggtcgagccaaaaaa
gaagtgaaatattttgcagaatcagatgatgaagatgcatttgaaatgtttgattag
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integrated database retrieval system
