Polyodon spathula (Mississippi paddlefish): 121314774
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Entry
121314774 CDS
T07273
Name
(RefSeq) sodium-dependent dopamine transporter-like isoform X1
KO
K05036
solute carrier family 6 (neurotransmitter transporter, dopamine) member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121314774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121314774
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121314774
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121314774
NCBI-ProteinID:
XP_041104374
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Position
4:complement(67087146..67121435)
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AA seq
616 aa
AA seq
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MIKGRLPVGQMSSVVAPARQSNDMGPKEVELILVKEQNGVQFTNSTLINPTQTTTGTEER
ETWAKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLFFMVIAGMPLFYMELAL
GQYNREGAAGVWKICPLFKGVGFTVILISLYVGFYYNVIIAWALYYLFSSFTGNLPWVNC
NNTWNSLNCSDIWTFNRTSHNVTHRSTPATEYFERGVLHLHESEGINDLGLPRWQLTSCL
TVVIVVLYFSLWKGVRTSGKVVWITATMPYVVLTGLLLRGVTLPGAIDGIKAYLSVDFHR
LWETSVWIDAATQICFSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSVNSLTSFFSGFVV
FSFLGYMAQKHNVALEDVATDGPGLVFIIYPEAIATLPWSSVWSVIFFIMLLTLGIDSAM
GGMESVITGLIDEFKFLRKHRKLFTLFIVLSTFLISLFCVTNGGIYVFTLLDHFAAGTSI
LFGVLIEAIGIAWFYGVGRFSDDIEEMIGHRPGLYWRLCWKYVSPLFLLCMVIISFGTFK
PPYYGTYVFPVWANIIGWCVAISSMAMVPIYAIYKLCVLPGTFRDKLAYAITPEREHHLV
ENGEVRQSKLHHWLMI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaggcagactaccagttggacagatgtcttcagtggttgctccagccaggcag
tcaaacgacatgggtcccaaagaggtggagctgattctggtgaaggagcagaatggggtc
cagtttaccaattccaccctgatcaacccaactcagactaccactggcacagaggagaga
gagacctgggcaaagaagattgatttcctcctctctgtgatcggattcgcagtggacctg
gcaaatgtctggaggttcccgtatctgtgctacaaaaatggaggaggagcatttcttgtc
ccctacctgttcttcatggttattgctggaatgcccctcttctacatggagctggcattg
gggcagtacaaccgtgaaggagctgctggtgtctggaagatatgccccctgttcaaaggt
gttgggtttaccgtgatcttgatctccttgtacgtgggcttctactacaatgtgatcata
gcctgggccctctactatttgttctcttccttcactgggaacctcccatgggtgaactgc
aacaacacctggaacagtttgaactgttcagacatctggactttcaacaggacgtcccac
aatgtgacacacaggtcaaccccagcaacagagtactttgagagaggcgtgctgcacctt
catgagagtgaagggatcaatgacttgggcttgcccaggtggcagctgacatcctgtttg
actgtggtgattgtggtcctctacttcagcctgtggaaaggagtgaggacttcagggaag
gttgtctggatcactgctaccatgccatatgtggtcctgactgggctactactacgtgga
gttaccctccccggagccattgatggcataaaggcttacttgagtgtcgatttccaccgg
ctttgggagacttcggtctggatagacgctgccactcagatctgcttctctctaggagtt
gggtttggtgtgctaatagcgttctcaagctataacaaattcagcaacaactgttataga
gatgcaatcattaccagctcagttaactccttaacaagctttttctctggatttgtcgtc
ttctcattcctgggctacatggcacaaaagcacaacgtggctcttgaggatgtggccact
gatggacctggacttgtgtttatcatataccctgaagctattgctactttgccatggtcc
tctgtctggtcagtgatcttcttcataatgttgctgaccctaggtattgacagtgctatg
ggtgggatggagtcagttatcactggtctgattgatgagttcaagttcctgcgcaaacac
cggaagctctttaccctcttcatagttttgtcaacattcttgatatctcttttctgcgtc
acaaatggtggtatttatgtttttactctgctagaccatttcgctgcaggaacatcaatt
ctttttggagtgcttattgaggctattggcattgcttggttctatggagttgggcggttt
agtgatgacatagaggaaatgataggccataggcctggcctgtactggaggttgtgctgg
aagtatgtgagtcctctcttcctcttgtgcatggtgatcatcagctttggaacatttaag
cctccctattatggaacctatgtttttccagtctgggccaacataataggttggtgtgtt
gccatatcttcaatggcaatggtacccatatacgccatctacaaattatgtgtgctgcca
ggaactttccgagataaactagcctacgcaattacacctgagagagagcatcatctagtg
gaaaatggggaagttcgtcagtctaagcttcaccactggctgatgatataa
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