Polyodon spathula (Mississippi paddlefish): 121314777
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Entry
121314777 CDS
T07273
Symbol
irx4b
Name
(RefSeq) iroquois-class homeodomain protein IRX-4b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314777 (irx4b)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121314777 (irx4b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121314777
NCBI-ProteinID:
XP_041104380
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Position
4:complement(67367532..67377685)
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AA seq
480 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLTTCCESSGRTVAESGAAASHQTPVYCPVYESRLLATA
RHEFNSAAALGVYGNTYTSSQGYGNYVTYGTDASAFYSLSTFDSKDGTGSAHAGITQAAA
YYPYDASLGPYQYDRYGTMDVGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKIYDVEEGDESQEEHIKTEKNDDD
NRSRDDKELQLSDLEDFEAIESESSECELKHQFHMGSTHIRTTDCQNDHFKEASLKILIP
SSLEGDQEIGKNCLKTVSDDCERDLITGRQAKTCFQQRQQMLESKPRIWSLAQTATSLNQ
TEYPSCMLKCQQVIPSSPAVSSPVNAIDRQQDSPVTTLRNWVDGVFHDPLFRHSTLNQAL
TNTTVSWATSKGTILETGALEHSIANTTSVVKGHIPSLQHQESNKDNLVFTQSGSKAFCS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacccacaatttggatatccgtactcatctgcaccccagttcctaatgaccaca
aattctttgacaacttgctgcgaatctagcggcagaactgtggctgaatctggggctgca
gcctctcatcaaacgccagtttattgtcctgtgtatgagagcaggcttctggccacagcc
aggcacgagtttaattctgcagctgctcttggagtctatgggaacacctacacgagcagt
caaggctatgggaactatgttacttatggcacggatgcctccgctttctactcattgagt
acattcgactcaaaggatgggaccggatctgcgcatgcggggatcacccaggctgcagcc
tattatccttatgatgcttctttggggccgtatcagtatgacagatatggcacaatggat
gtggggacaagaagaaaaaatgccactcgtgaaacaactagtaccctcaaggcttggctc
caggagcacaggaaaaacccctaccccaccaaaggagaaaagatcatgctggccatcatc
accaagatgaccctgacccaggtctccacctggttcgccaatgccaggaggagacttaag
aaggagaataaaatgacctggcccccacgaaacaagtgctctgatgagaagatatacgat
gttgaagaaggagatgaatctcaagaggagcacatcaagaccgaaaagaacgatgatgat
aacagaagcagagatgacaaggagttgcagctgagtgacctagaagactttgaagcgatt
gagtcagagagttctgagtgcgagctgaaacaccagtttcacatgggcagtacccatatt
agaaccaccgactgtcagaatgatcacttcaaagaagcctccttaaagatcttaattccg
tcatcacttgaaggagatcaggaaattggcaaaaactgtctaaagacggtgtctgatgat
tgtgaacgtgatctgataactgggaggcaggcaaaaacgtgttttcaacagagacagcaa
atgctggagagcaagccacgaatctggtcgctggcacaaaccgcgacttctttgaatcaa
actgagtatccttcctgcatgctgaagtgtcaacaggtgatcccttcatctccagctgtt
tcctcccctgttaatgcaattgacagacaacaagattcaccagtgaccactctcagaaac
tgggtggatggtgttttccatgatccattgtttaggcacagcactttgaaccaagcattg
actaataccacagtttcatgggccacttctaaaggcactatattggagacaggggcactg
gaacattccattgcaaatactaccagtgtggtcaaaggacacattcctagtttacaacac
caagaatcaaataaagacaatttggtatttactcagtcgggaagcaaagcattttgctca
taa
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