Polyodon spathula (Mississippi paddlefish): 121314779
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Entry
121314779 CDS
T07273
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121314779 (irx1b)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121314779 (irx1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
121314779
NCBI-ProteinID:
XP_041104383
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All DBs
Position
4:67979491..67984364
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AA seq
458 aa
AA seq
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MSFPQLGYPQYLSATQAMYGGERPGVLSTSVRGGSAEIGANPSATAAAVTSMLGMYANPY
AAHNYSAFLPYTSADLALFSQMGSQYEMKDNPGVHPATFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGARDKDDEDGNIFGSDNEGDVEKNEDDEEIDLESIDIDKIDENDGEQSNEEDEEKLE
SRDHGELVENMEKKQDLTVQAPVGYDKPKDISVVKEPPESNNTRVISPIGQGNFQMPSNN
KPKIWSLAETATSPDSSQKPSSPSAPTNHSSPQIQHPAFLPNHGLYTCQIGKFHNWTNGA
FLSQNSLLNVRSFLGVNQHHHHHLHSQQQQTSVVTSTMASLSSDKSSESSSLKHIEQESV
QRTESPTQPLKSSFQPTHDSPRNQQEATQRVLTALSSA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccccagttgggctaccctcaatatttaagtgccacccaggcaatgtacgga
ggcgaacggccgggagttctgagtacctctgtacgtggaggaagcgctgaaatcggggca
aatccttctgccacagccgctgctgtcacctcgatgctgggcatgtacgcaaacccttac
gcagcgcacaattacagcgcttttcttccttacaccagtgccgatctggctctcttctct
cagatgggctcccaatatgaaatgaaggacaaccccggtgttcatcctgctacatttgct
gcccacacttccccggccttttacccttatggacagttccagtatggggaccctgccaga
cccaagaatgccaccagggagagcacgagcaccctcaaggcctggctcaacgaacacagg
aaaaacccataccccaccaaaggagaaaagatcatgctggccatcatcaccaagatgacc
ctgacccaggtctccacctggtttgccaatgccaggagaaggctcaagaaggagaacaag
gttacatggggtgccagggacaaagacgacgaggatggcaacatctttggtagtgataat
gagggtgatgttgaaaagaacgaagatgatgaagaaattgacttggagagcatagacatt
gacaagatcgatgagaacgatggggagcaaagcaatgaagaggatgaggagaaactggaa
agcagggatcatggggagttggtggagaatatggagaaaaaacaagacttgactgtgcag
gcacctgtaggatatgataagcccaaagatatatcagtggttaaagagccacctgaaagc
aataacacaagggtgatatcacctattgggcagggcaatttccagatgccatcaaacaac
aaacctaagatctggtccttagcagagactgccaccagccctgatagttctcaaaagccc
tcgtcgccttctgcaccaaccaaccattcctcaccccagatccaacacccagcttttctc
cctaatcatggactatacacttgccagattgggaagttccacaattggacaaatggtgct
ttcctgagccaaaattccctgttaaatgtgaggtcttttctgggagtaaatcaacatcac
catcaccatcttcattcccagcagcaacaaacttcggtagtcacgtcaacaatggcatca
ctgagcagcgacaagtcttcagagagttccagtctgaaacacatagaacaggaaagtgtt
caacgtactgaatctccaacacagccattaaaatcgtcatttcagcccacccacgacagt
cccaggaatcaacaagaggcaacacaacgggttttaacagctctttcttcggcctga
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