Polyodon spathula (Mississippi paddlefish): 121314787
Help
Entry
121314787 CDS
T07273
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121314787 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121314787 (tent4a)
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121314787 (tent4a)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121314787 (tent4a)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
121314787 (tent4a)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
121314787 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
WI12
Motif
Other DBs
NCBI-GeneID:
121314787
NCBI-ProteinID:
XP_041104395
LinkDB
All DBs
Position
4:68715233..68736769
Genome browser
AA seq
793 aa
AA seq
DB search
MDPRVAWIQPEQNGPANALWMHIWETSQGVRTNSSHHYHHNLAVNSPALDASFLKNGTAA
ATKSCCSSHQSRVANQSISSSNVTISSSVSNSNVNCPPSTQYISASRVGEGKRLQKTLSL
SSSSTSSSVESGTESPSSTFSLARTSNGDINNKSAGSNLFFNFSENLHNVNNHSHHQQQQ
NHNRQNYHGTTTTTINNHHPGRRKSENKASTYGINYLLSSWSNGNYQLCSGTPWKKRKYS
PGINGLHEEIIDFYNFMSPRPQEAAMREDVVRRIETVIKDLWPTADVQIFGSFSTGLYLP
TSDIDLVVFGKWERPPLQLLEQALRKHNVAEPYSIKVLDKATVPIIKLTDQETEVKVDIS
FNVETGVKAAQFIKGYIQKYTILPYLIFVLKQFLLQRDLNEVFTGGISSYSLILMVISFL
QLHPRIDARGPNVNLGILLIEFFELYGRHFNYLKTGIRIKNGGAYVAKEEIMKVMANGYR
PSMLCIEDPFLPGNDVGRSSYGAMQVKQVFDYAYIVLGHAVSPLARSYPNKDSESTLGRI
IKVTQEVIDYREWIIKKWGGRSSPRLDTCDPGIKTSEQIEHSGLSLVSEQLQNRDSVSPR
SMDSPMSMSSPQQHSCSSSASSVSSLSGSDIDCDSTPCPATNIHPFPIQVLPLASLAPAL
QRPNGKQNLSGALIMSSSSQARLSMPGALAVTSLPGRRVCIEGAPPLNAVFHMPPPAAPP
APPSPLPSPHLHHKMHNGPKYSIKGVNVPGTAHNPMMGAMKQPVNTRGQNQYNRNTWRRR
KHTREILPISLSR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtagcttggattcagcctgaacagaatggacctgctaatgccttgtgg
atgcatatatgggagacctctcagggagtccggaccaattcaagccaccactatcaccac
aatctcgctgtcaactcgccggctttggacgccagttttttaaaaaatggaacagctgcg
gcgactaaaagctgctgtagcagccatcagagccgtgttgctaaccagagtattagcagc
agcaatgttactatttcttccagcgtttcaaacagcaacgtaaactgtcccccttctacc
cagtacatcagcgcgtcaagggtaggagaggggaaaaggttgcaaaagaccctctctcta
tcatcttcatctacgtcctcctctgtggagtctggcacggaaagcccttcgtccacattt
tctttggcaaggactagtaatggtgatatcaataacaagtctgctggtagcaacttattt
ttcaatttcagcgagaatttgcacaatgtgaataatcacagccaccaccagcaacagcaa
aaccacaatcgccagaattatcacggcactactacgactactattaacaaccatcaccca
ggccggagaaaaagtgaaaataaagcgagcacctacgggataaactacctgctttccagc
tggagcaacggcaactatcagctttgctccgggaccccctggaaaaaaaggaagtatagc
ccaggcattaatggcctccatgaagagattattgacttctataacttcatgtctccacgt
cctcaagaagcagctatgcgtgaagatgtggtgaggaggatagaaacggttataaaagac
ctatggcctacagccgatgttcagatttttggcagctttagtacaggtctttatctccca
acaagtgatattgatttggttgtctttgggaaatgggagcgaccccctttgcagctattg
gaacaagcactacggaaacacaatgtggctgagccttactcaattaaagtccttgacaaa
gctacggtaccaataatcaaactcactgaccaagagactgaagtgaaagtagacatcagt
ttcaacgtagaaactggtgtgaaggcagctcagtttatcaagggctacattcagaaatat
accatcctgccttacttgatatttgtattaaagcagttcctccttcagagggatttgaat
gaggtttttactggcgggattagctcttacagcctcattttaatggtcatcagcttcctg
cagttgcacccaagaattgatgccagaggacccaatgtaaatcttggcattcttctgatt
gaattctttgagctttatggaaggcatttcaactacttgaaaaccggtattcggattaaa
aatggaggcgcttatgttgccaaagaagaaatcatgaaagtcatggcaaacggctacaga
ccgtcaatgttgtgcattgaagaccctttcttgccaggaaatgatgtgggcaggagttcc
tatggtgccatgcaagtgaaacaggtgttcgactatgcctacattgtgcttggtcatgct
gtatcgccacttgcaaggtcttaccccaacaaagactctgagagcactttaggtcgaata
attaaagtgacccaagaggttatagattacagggaatggatcataaagaagtggggaggg
agaagcagcccacggttggatacttgtgatccaggtataaagacatctgagcagatagag
cacagcggcctgagtcttgtgagtgagcaactgcagaaccgtgattctgtgtcaccacgt
agcatggattccccgatgtccatgtccagcccccagcagcactcctgcagctcatcggcg
tcctctgtctcatcgctgtctggaagtgacattgactgtgattcaactccttgtccagcc
acgaacattcacccatttccaatccaagtactacctttggcctctctagcgcctgcactg
caaaggccgaatgggaagcagaatctgtctggggcattaataatgtcttccagctcccag
gcaagactgtctatgccaggtgcccttgctgttacatcactgcctggcagacgtgtttgt
atagaaggggcacctcctttgaatgcggtctttcatatgccccctccggctgctccccct
gccccacccagccctctgccaagtccccacctgcaccacaagatgcacaacgggccaaaa
tattccataaaaggagtcaatgtcccagggactgcccacaaccccatgatgggggccatg
aagcagcccgttaacacccgggggcagaaccagtacaaccgcaacacctggcgaaggagg
aagcatacgagagaaatcttacctatcagccttagcagatga
DBGET
integrated database retrieval system
